Pairwise Alignments

Query, 607 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., Arabinose 5-phosphate isomerase KdsD from Alteromonas macleodii MIT1002

 Score =  104 bits (260), Expect = 9e-27
 Identities = 122/608 (20%), Positives = 246/608 (40%), Gaps = 31/608 (5%)

Query: 3   DKFNMQSPPFNRLTAEQQHQLRSALDVAYFRQRDVLIDAQHPVTHLHILIKGTVEERSPD 62
           + F   S PF  L  +Q+H L    ++ Y    +V  D       L ++  G    +  D
Sbjct: 9   EDFLNTSAPFELLDNDQKHALVKHTELIYLTNENVN-DVFKDKVSLFLIQSGQFSVKDSD 67

Query: 63  GKEVFAHYANDDLFDVRAMFEELSKHQYMALEDTLSYLLPKSIFLQLYEQNGEFAAYFDN 122
                 H ++ D F    + E+ +    + ++         ++ ++   +      +FD 
Sbjct: 68  APT--RHLSDGDYFGYTNIIEKSNFPLSITVDSPGLVYCFDALAIEPLLEIPVIRHFFDG 125

Query: 123 NLAKRQELIEAAAQQKNIAEFILTKVDRSIYHPPFILSPEQPIHSVTQQLKERGIDAALV 182
               R   ++  A   + + ++   +  +I   P  +  + PI    Q +  + + + LV
Sbjct: 126 ---LRNNALQNHAIADSNSMWLYKGLTDAIEKAPVSVDAQTPITVAAQLMTSQKVSSLLV 182

Query: 183 ELHPSDPRLAHNHAHPYAIVTRTNMLHAVMLEGRPLDTPVGEIATFPVLHVDEGDFLFNA 242
                + +L         I+T  ++   V+     +  PV +I T     +     LF+A
Sbjct: 183 T---QEEKLI-------GIITDRDLRSRVVAASLDIHLPVSQIMTANPAQIMGNRTLFDA 232

Query: 243 MVMMTRQRIKRVMVCLGNQA---VGLLSLIQILSAFSTHSHVLTLAIARAASIDELALAA 299
           + +MT + I  + V + NQ    +G+++   I+     +   +   +++A ++ EL   +
Sbjct: 233 LALMTEKNIHHLPV-IDNQTQVPLGMVTASDIIRHQRGNVLFIIGELSKAENLYELTRLS 291

Query: 300 NKQRELVESLMSRGVRTRFVMELIAAVNEQIIEK--AFELVVPPALHDQCCLVVLGSEGR 357
            +      +   +        ++++   + +  K   F              +V GS+ R
Sbjct: 292 WQLPHYFSAHAKKAGDYDIAGKILSQATDIMTRKLIGFFQQANGKAPMMFAWLVYGSQAR 351

Query: 358 GEQILKTDQDNALIIQDGLEWHQCQ---PIMETLTHTLLQLGYPLCPGKVMVNNPKWVRS 414
            +Q + +DQDN L++ +     Q +    + + + + L + G  LC G +M +NPK   S
Sbjct: 352 EDQTMGSDQDNGLLLAERPSEAQAEYFAKMADYVCNGLAKCGIKLCDGNIMASNPKLRLS 411

Query: 415 QSDWKRTLTDWVKAARPEQVMDIAIFADAHAVAGNRALLAPVKAHLQHLMAGQELILAEF 474
             +       WVKA   + +M   IF D    AG+ +L   ++     LM  Q + LA  
Sbjct: 412 LEEAIEEAKRWVKAPTKDAIMHFNIFLDVRCAAGDISLFKQLQRQRAPLMK-QNMFLAAL 470

Query: 475 TRPALNFSVPLTLFGNV-----KSSKQGIDIKQGGIFPIVHGVRALSLEHAIDANNTFDR 529
           TR +   SVPL++F        +  K  ID+K   +  I +  R  +L   +   NT  R
Sbjct: 471 TRNSNEISVPLSMFQKFIYEKGRKEKDVIDLKTRAVALINNIARIYALADGVTLPNTLAR 530

Query: 530 IEALVKKRVLEQETGDNLSEAFKLFLKLRLAQQLGNQHSTNQLDFKQLDRTERDLLRHSL 589
           ++AL +   L +    NL + +    +LR   QL N+ + N++    L   E+  L+ + 
Sbjct: 531 LDALSENSQLSKSDATNLRDIWLFLNRLRWHHQLENKVTDNRVSVSSLSSIEKHQLKAAF 590

Query: 590 HVVKKFKQ 597
             +++  Q
Sbjct: 591 KAIERTNQ 598