Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

 Score = 56.2 bits (134), Expect = 5e-13
 Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 17/176 (9%)

Query: 31  VSLDCETTSLDPKRAE-LVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHRIRHQ 89
           +  D ETT  DP   + LV I   +++ NR+ T + F       + + S +  +H +  Q
Sbjct: 4   IIFDTETTGFDPASGDRLVEIGCIELI-NRVPTGRTFHAYYNPQRDMPSAAEAVHGLSSQ 62

Query: 90  DLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILD----IACRKHLGFPLPNRLIEVS 145
            L D    +E + +L++F+ + PLV ++ R+D   L+    +  R  +        + ++
Sbjct: 63  FLSDKPLFREGVAELMDFLEDSPLVAHNARFDFGFLNHELKLCARDAVSMDRMIDTVAIA 122

Query: 146 QIYHDKLEKHLPNAYFDLSLEAICRH--LDLPLQDKHDALQDAIAAALVFVRLTKG 199
           +  H    KH        SL+A+C    +D   + KH AL DA   A ++V LT G
Sbjct: 123 RTLHPG-AKH--------SLDALCTRYGIDRSHRVKHGALLDAELLAQLYVELTGG 169