Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., DNA polymerase III subunit epsilon from Methylophilus sp. DMC18

 Score = 53.5 bits (127), Expect = 3e-12
 Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)

Query: 31  VSLDCETTSLDPKRA-ELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHRIRHQ 89
           + LD ETT L P +   ++ IAA +++ NR  T + F + +   + +D+G+  +H I  +
Sbjct: 4   IFLDTETTGLYPDQGHRIIEIAAVEML-NRRPTQRHFHLYINPEREIDAGAQEVHGISLE 62

Query: 90  DLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPLPNRLIEVSQIYH 149
            L D     +     I FI    L+ ++  +D   L++   +    PLP+ +  +     
Sbjct: 63  FLQDKPLFAQIAQDFIAFIRGAELIIHNAPFDVGFLNMELSRLSMDPLPSFVSGIVDTL- 121

Query: 150 DKLEKHLPNAYFDLSLEAICRH--LDLPLQDKHDALQDAIAAALVFVRLTKG 199
            K+ K +     + +L+A+CRH  +D   +  H AL DA   A V++ +T+G
Sbjct: 122 -KMAKEMRPGQRN-NLDALCRHYGIDNSQRTLHGALLDAELLADVYIAMTRG 171