Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., DNA polymerase III subunit epsilon from Magnetospirillum magneticum AMB-1

 Score = 55.5 bits (132), Expect = 8e-13
 Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 15/178 (8%)

Query: 31  VSLDCETTSLDPKRAE-LVTIAATKIVDNRIITSQPFEVRLCAPQ-SLDSGSVRIHRIRH 88
           + LD ETT  DP     LV I   ++  N + T   F  R C P+  +   + ++H +  
Sbjct: 4   IVLDTETTGFDPLSGHRLVEIGCVELF-NHLPTGSVFH-RYCNPERDMPEEAFKVHGLSA 61

Query: 89  QDLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGF-PLP-NRLIEVSQ 146
             L D     E +   +EFIG+ PLV ++  +D   ++    + LGF PLP +R I+   
Sbjct: 62  DFLSDKPLFAEIVADFLEFIGDVPLVIHNAEFDMRFINAELTR-LGFPPLPMSRSIDTVM 120

Query: 147 IYHDKLEKHLPNAYFDLSLEAICR--HLDLPLQDKHDALQDAIAAALVFVRLTKGDLP 202
           +      K  P A    +L+A+CR   +D   + KH AL D+   A V+++L  G  P
Sbjct: 121 M----ARKRFPGA--QANLDALCRRFEIDNTHRTKHGALLDSELLAEVYLQLIGGRQP 172