Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., DNA polymerase III subunit epsilon from Azospirillum sp. SherDot2

 Score = 45.8 bits (107), Expect = 6e-10
 Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 13/174 (7%)

Query: 31  VSLDCETTSLDPKRAE-LVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHRIRHQ 89
           + LD ETT   P+    LV I   ++V N + T + F V L   + +   +  +H +  +
Sbjct: 4   IVLDTETTGFKPEEGHRLVEIGCIELV-NHLATGERFHVYLNPERDMPPEAFAVHGLSTE 62

Query: 90  DLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPL--PNRLIEVSQI 147
            L D     +     + FIG+ PLV ++  +D   L+    K  G+P+   +R ++   +
Sbjct: 63  FLADKPLFNDVAADFVAFIGDAPLVIHNAAFDMHFLNWEL-KIAGYPVMPKDRAVDTLLM 121

Query: 148 YHDKLEKHLPNAYFDLSLEAICRHLDLPLQDK--HDALQDAIAAALVFVRLTKG 199
              K     P +    +L+A+C+   +   ++  H AL DA   A V++ L  G
Sbjct: 122 ARQK----FPGS--PATLDALCKRFGVDNSNRTLHGALLDAQLLAEVYLELLGG 169