Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., tRNA-dihydrouridine(20/20a) synthase from Xanthobacter sp. DMC5

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 75/246 (30%), Positives = 119/246 (48%), Gaps = 15/246 (6%)

Query: 23  VAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRSVQIAG 82
           VAPM   TDR  R     +     +   M   PA+    +++     + E  + +VQ+ G
Sbjct: 11  VAPMMDWTDRHCRVFHRTFSRHALLYTEMVTAPAVIHGDRARLLGFSDAEHPV-AVQLGG 69

Query: 83  SDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDILKAVVNAVN 142
           SDP L+A+AA+   + G   I++N+GCP+ +V     G+ L+R P V+ D + A+ +AV 
Sbjct: 70  SDPALLAQAARICADFGYDEINLNVGCPSDRVQGGNFGACLMREPQVVADCVAAMKSAVA 129

Query: 143 VPVTLKTRTGW-DTDNKNCL-SIAQLAEDCGIQALALHGR--------TRACMYKGEAEY 192
           +PVT+K R G  D D +  L ++A      G   L +H R         R        +Y
Sbjct: 130 LPVTVKCRIGVDDQDPEEALDTLADAVLAAGCDGLIVHARKAWLNGLSPRENRDIPPLDY 189

Query: 193 DSIKAVKAAV-SIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHFLE 251
           D ++ +KA +  + V  NG ++S   A+ + E  G D +M GR A   P +  E+   L 
Sbjct: 190 DRVRRLKARLPHVRVALNGGLES--LAQGLAEADGLDGIMFGRAAYHTPELLAEVDPTL- 246

Query: 252 HGTTMP 257
           HG   P
Sbjct: 247 HGVPAP 252