Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., tRNA-dihydrouridine synthase C from Pseudomonas simiae WCS417

 Score =  131 bits (329), Expect = 3e-35
 Identities = 84/235 (35%), Positives = 128/235 (54%), Gaps = 10/235 (4%)

Query: 21  LIVAPMAGVTDRPFRELCLRYGA-GMAVSEMMSCNPALWKTA---KSQNRMVHEGESGIR 76
           + +APM G+ D   R++  R G     V+E +  N  L   A   K    ++H   +   
Sbjct: 3   IALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVNDRLLTPAYFHKLAPELLHGAHTAAG 62

Query: 77  ---SVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDI 133
               VQ+ GSDP  +AE A  + E G+Q+ID+N GCPAK VNK   G+ LL+ P+++  I
Sbjct: 63  VPLRVQLLGSDPVCLAENAALACELGSQVIDLNFGCPAKTVNKSRGGAVLLKEPELLNQI 122

Query: 134 LKAVVNAV--NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEAE 191
           ++ V  AV  ++PVT K R G+D+ +   +    LAE  G   + +H RT+   YK  A 
Sbjct: 123 VEHVRRAVPAHIPVTAKMRLGFDSPDGALVCATALAEG-GAAHIVVHARTKTDGYKPPAH 181

Query: 192 YDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEI 246
           ++ I  V+  V +PV ANGDI S E  +   E +GA+ +M+GR    RP + ++I
Sbjct: 182 WEWIPRVQEVVKVPVFANGDIWSVEDWKRCREVSGAEDIMLGRGLVARPDLARQI 236