Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., tRNA dihydrouridine synthase DusB from Variovorax sp. OAS795

 Score =  357 bits (915), Expect = e-103
 Identities = 184/324 (56%), Positives = 230/324 (70%), Gaps = 3/324 (0%)

Query: 10  LKIGNYQLKNNLIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVH 69
           L+IGN+ L+N L VAPMAGVTDRPFR LC   GAG AVSEM++    LW T K+  R  H
Sbjct: 3   LQIGNHALENRLFVAPMAGVTDRPFRMLCRALGAGYAVSEMVTSRKELWNTLKTSRRANH 62

Query: 70  EGESGIRSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDV 129
           +GE G  SVQIAG+D  +MAEAA +++E GAQIIDINMGCPAKKV  K AGSAL+R   +
Sbjct: 63  DGEPGPISVQIAGTDAAMMAEAAVYNIERGAQIIDINMGCPAKKVCNKWAGSALMRDEPL 122

Query: 130 IEDILKAVVNAV---NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMY 186
             +I++AVVNA    NVPVTLK RTGW  +++N + +A+  E  G+Q L +HGRTR   Y
Sbjct: 123 ALEIVQAVVNAAQPFNVPVTLKMRTGWSEEHRNAVKLARNFESAGVQMLTVHGRTREQGY 182

Query: 187 KGEAEYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEI 246
           KG AEYD+I AVKAAV +PV+ANGDI SPEKAR VL  TGADA+MIGR AQGRPWIF+EI
Sbjct: 183 KGSAEYDTIAAVKAAVRVPVVANGDIRSPEKARDVLAATGADAVMIGRAAQGRPWIFREI 242

Query: 247 QHFLEHGTTMPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQASAFR 306
            HFL+ GT +    ++EV+ ++L H+   +  YGE+ G R ARKH+ WY++      AFR
Sbjct: 243 AHFLDTGTHLAPPLVAEVRRLLLDHLVEHYALYGEFSGVRTARKHIGWYVRTLPDGEAFR 302

Query: 307 RTFNAIETADQQLDALEGYFDNVA 330
              N IE +  QL A+  YFD +A
Sbjct: 303 ARMNTIEDSAAQLRAVGDYFDGLA 326