Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., tRNA dihydrouridine synthase B (EC 1.-.-.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  316 bits (810), Expect = 5e-91
 Identities = 168/325 (51%), Positives = 221/325 (68%), Gaps = 7/325 (2%)

Query: 10  LKIGNYQLKNNLIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVH 69
           +++G + L N L VAPMAGVTDRPFR+LC R GAG AVSEM++  P L  + K+  R  H
Sbjct: 1   MQLGAFTLPNALFVAPMAGVTDRPFRKLCKRLGAGYAVSEMVTSRPDLQDSLKTSRRANH 60

Query: 70  EGESGIRSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDV 129
           EGE+   SVQIAG+D Q+MA+AA+++++ GAQIIDINMGCPAKKV  K AGSAL++   +
Sbjct: 61  EGEAAPISVQIAGTDAQMMADAARYNIDRGAQIIDINMGCPAKKVCNKWAGSALMQDEAL 120

Query: 130 IEDILKAVVNAVN---VPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMY 186
             +I++AVV A     VPVTLK RTGW    +N  ++A  AE  G+Q L +HGRTR   Y
Sbjct: 121 AIEIVQAVVAACEPHGVPVTLKMRTGWCASVRNAPTLALAAEAAGVQMLTVHGRTREQGY 180

Query: 187 KGEAEYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEI 246
           KG+AE+D++  +K+ V IPV+ANGDIDSPE+AR VL  TGADA+M+GR AQGRPWIF+EI
Sbjct: 181 KGQAEHDTVAHIKSRVRIPVVANGDIDSPEQAREVLRRTGADAIMVGRAAQGRPWIFREI 240

Query: 247 QHFLEHGTTMPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQE----HEQA 302
            HFL  G  +P   +++V+  +L H+   +  YGE  G R ARKH+ WY Q        A
Sbjct: 241 AHFLATGEHLPPPDLADVRVWLLDHLHDHYDLYGEDTGVRSARKHLGWYAQSLPLPPGAA 300

Query: 303 SAFRRTFNAIETADQQLDALEGYFD 327
           + FR   NA+ T + QL  +    D
Sbjct: 301 ALFRSRVNAVTTVEAQLRCVSESLD 325