Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., tRNA-dihydrouridine synthase C (EC 1.-.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  115 bits (289), Expect = 1e-30
 Identities = 92/317 (29%), Positives = 154/317 (48%), Gaps = 32/317 (10%)

Query: 21  LIVAPMAGVTDRPFRELCLRYGA-GMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRS-- 77
           +++APM GV D   REL        + ++E +     L    K  +R+  E     R+  
Sbjct: 22  VLLAPMEGVLDALVRELLTEVNDYDLCITEFVRVVDQLLPV-KVFHRICPELHHASRTPS 80

Query: 78  -----VQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIED 132
                +Q+ G  PQ +AE A  +   G+  +D+N GCP+K VN    G+ LL+ P++I  
Sbjct: 81  GTPVRIQLLGQHPQWLAENAARATALGSYGVDLNCGCPSKVVNGSGGGATLLKDPELIYQ 140

Query: 133 ILKAVVNAV--NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGE- 189
             KA+  AV  ++PVT+K R GWD+ ++    IA   +  G   L +HGRT+A  Y+ E 
Sbjct: 141 GAKAMRAAVPSHLPVTVKVRLGWDSGDRK-FEIADAVQQAGASELVVHGRTKAQGYRAEH 199

Query: 190 AEYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHF 249
            ++ +I  ++  ++IPVIANG+I   + A+  +  +G DA+MIGR A   P + + +++ 
Sbjct: 200 IDWQAIGEIRQRLTIPVIANGEILDWQSAQACMATSGCDAVMIGRGALNIPNLSRVVKY- 258

Query: 250 LEHGTTMPELPISEVKDIM-------------LGHVTALHQFYGEYLGPRIARKHVSWYL 296
                  P +P  EV  ++             L HV  + Q+ G      I    +   +
Sbjct: 259 -----NEPRMPWPEVVTLLQKYTRLEKQGDTGLYHVARIKQWLGYLRKEYIEATELFQSI 313

Query: 297 QEHEQASAFRRTFNAIE 313
           +   ++S   R   AI+
Sbjct: 314 RALNRSSEIARAIQAIK 330