Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., tRNA-dihydrouridine synthase C (NCBI) from Escherichia coli BW25113

 Score =  118 bits (295), Expect = 2e-31
 Identities = 92/295 (31%), Positives = 156/295 (52%), Gaps = 21/295 (7%)

Query: 21  LIVAPMAGVTDRPFRELCLRYGA-GMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRS-- 77
           +++APM GV D   REL        + ++E +     L    K  +R+  E ++  R+  
Sbjct: 3   VLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPV-KVFHRICPELQNASRTPS 61

Query: 78  -----VQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIED 132
                VQ+ G  PQ +AE A  +VE G+  +D+N GCP+K VN    G+ LL+ P++I  
Sbjct: 62  GTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQ 121

Query: 133 ILKAVVNAV--NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGE- 189
             KA+  AV  ++PV++K R GWD+  K    IA   +  G   L +HGRT+   Y+ E 
Sbjct: 122 GAKAMREAVPAHLPVSVKVRLGWDSGEKK-FEIADAVQQAGATELVVHGRTKEQGYRAEH 180

Query: 190 AEYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHF 249
            ++ +I  ++  ++IPVIANG+I   + A+  +  +G DA+MIGR A   P + + +++ 
Sbjct: 181 IDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKY- 239

Query: 250 LEHGTTMPELPISEVKDIMLGHVTALHQ-FYGEYLGPRIARKHVSWYLQEHEQAS 303
                  P +P  EV  ++  +     Q   G Y   RI ++ +S+  +E+++A+
Sbjct: 240 -----NEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARI-KQWLSYLRKEYDEAT 288