Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., putative TIM-barrel protein, nifR3 family from Enterobacter asburiae PDN3

 Score =  448 bits (1153), Expect = e-131
 Identities = 219/321 (68%), Positives = 263/321 (81%)

Query: 10  LKIGNYQLKNNLIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVH 69
           ++IG++QL+N LI APMAG+TDRPFR LC   GAG+ VSEMMS NP +W++ KS+ RMVH
Sbjct: 1   MRIGHHQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVH 60

Query: 70  EGESGIRSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDV 129
             E GIR+VQIAGS P+ MA+AA+ +VE+GAQIIDINMGCPAKKVN+KLAGSALL+YPD 
Sbjct: 61  VDEPGIRTVQIAGSVPEEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDQ 120

Query: 130 IEDILKAVVNAVNVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGE 189
           ++ IL AVV+AV+VPVTLK RTGW   ++NC+ IAQLAEDCGIQAL +HGRTRAC++ GE
Sbjct: 121 VKAILTAVVSAVDVPVTLKIRTGWSPVHRNCVEIAQLAEDCGIQALTIHGRTRACLFNGE 180

Query: 190 AEYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHF 249
           AEYDSI+AVK  VSIP+IANGDI  P KAR VL+YTGADALMIGR AQGRPWIF+EIQH+
Sbjct: 181 AEYDSIRAVKQKVSIPIIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHY 240

Query: 250 LEHGTTMPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQASAFRRTF 309
           L+ G  +  LP++EVK ++  HV  LH  YG+  G RIARKHVSWYLQEH     FRRTF
Sbjct: 241 LDTGELLAPLPLAEVKRLLCSHVRELHDHYGQAKGYRIARKHVSWYLQEHAPDDQFRRTF 300

Query: 310 NAIETADQQLDALEGYFDNVA 330
           NAIE A  QL+ALE YF+N+A
Sbjct: 301 NAIEDASVQLEALEAYFENLA 321