Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., tRNA dihydrouridine synthase DusB from Escherichia coli ECRC99

 Score =  415 bits (1067), Expect = e-121
 Identities = 204/289 (70%), Positives = 239/289 (82%)

Query: 42  GAGMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRSVQIAGSDPQLMAEAAQFSVENGAQ 101
           GAG+ VSEMMS NP +W++ KS+ RMVH  E GIR+VQIAGSDP+ MA+AA+ +VE+GAQ
Sbjct: 2   GAGLTVSEMMSSNPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQ 61

Query: 102 IIDINMGCPAKKVNKKLAGSALLRYPDVIEDILKAVVNAVNVPVTLKTRTGWDTDNKNCL 161
           IIDINMGCPAKKVN+KLAGSALL+YPDV++ IL  VVNAV+VPVTLK RTGW  +++NC 
Sbjct: 62  IIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCE 121

Query: 162 SIAQLAEDCGIQALALHGRTRACMYKGEAEYDSIKAVKAAVSIPVIANGDIDSPEKARYV 221
            IAQLAEDCGIQAL +HGRTRAC++ GEAEYDSI+AVK  VSIPVIANGDI  P KAR V
Sbjct: 122 EIAQLAEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAV 181

Query: 222 LEYTGADALMIGRPAQGRPWIFQEIQHFLEHGTTMPELPISEVKDIMLGHVTALHQFYGE 281
           L+YTGADALMIGR AQGRPWIF+EIQH+L+ G  +P LP++EVK ++  HV  LH FYG 
Sbjct: 182 LDYTGADALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGP 241

Query: 282 YLGPRIARKHVSWYLQEHEQASAFRRTFNAIETADQQLDALEGYFDNVA 330
             G RIARKHVSWYLQEH     FRRTFNAIE A +QL+ALE YF+N A
Sbjct: 242 AKGYRIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA 290