Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., putative TIM-barrel protein, nifR3 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  198 bits (504), Expect = 1e-55
 Identities = 116/310 (37%), Positives = 173/310 (55%), Gaps = 5/310 (1%)

Query: 9   VLKIGNYQLKN-NLIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRM 67
           ++KIGN  L    L++APM  V+D PFR +C   GA +  +E +S    +   AKS  ++
Sbjct: 1   MVKIGNLALGEFPLLLAPMEDVSDPPFRAVCKENGADLMYTEFISSEGLIRDAAKSVQKL 60

Query: 68  -VHEGESGIRSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRY 126
            + E E  I  +QI G++   M EAA  + + G  I+DIN GCP  KV  K AG+ +L  
Sbjct: 61  DIFEYERPI-GIQIFGNEIDSMREAAAIAEQAGPDILDINYGCPVNKVACKGAGAGILLD 119

Query: 127 PDVIEDILKAVVNAVNVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMY 186
            D +  +   +V AVN+PVT+KTR GWD +    + + +  +D GIQA+++H RTR  MY
Sbjct: 120 IDKMVSMTAEIVKAVNIPVTVKTRLGWDNNTIRIVEVVERLQDVGIQAISVHARTRKQMY 179

Query: 187 KGEAEYDSIKAVK--AAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQ 244
           KGEA++  +  +K    + IP+  NGDIDSPE+AR   +  G D +MIGR A G PWIF 
Sbjct: 180 KGEADWTYLAKIKENQRIHIPLFGNGDIDSPERAREYRDRFGVDGMMIGRAAIGYPWIFN 239

Query: 245 EIQHFLEHGTTMPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQASA 304
           EI+H+ E G  +    + E  ++   H+    ++ GE LG    R+H + Y +       
Sbjct: 240 EIKHYFETGQKLAAPGLDERINVAKKHLDFSVKWKGEKLGILEMRRHYTNYFRGMPNFKP 299

Query: 305 FRRTFNAIET 314
           +R      +T
Sbjct: 300 YRTKMVTADT 309