Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., putative tRNA-dihydrouridine synthase from Alteromonas macleodii MIT1002

 Score =  114 bits (284), Expect = 4e-30
 Identities = 81/238 (34%), Positives = 125/238 (52%), Gaps = 14/238 (5%)

Query: 21  LIVAPMAGVTDRPFRELCLRYGA-GMAVSEMMSC-NPALWKTAKSQNRMVHEGESGIRS- 77
           +++APM GV D   R++  R G     V+E +   +  + K  K+  R+  E  +G ++ 
Sbjct: 3   VMLAPMEGVVDHLMRDMLTRVGGFDQCVTEFVRVVDQKIPK--KTFYRLCPELHNGGKTP 60

Query: 78  ------VQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIE 131
                 VQ+ G  PQ +AE AQ ++E G+  +D+N GCPAK VNK   G+ LL+    + 
Sbjct: 61  AGVPVRVQLLGQHPQWLAENAQTAIELGSPGVDLNFGCPAKTVNKSKGGAVLLKETQTLY 120

Query: 132 DILKAVVNAV--NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGE 189
           DI+KAV +AV   +PV+ K R G++ D    +  A    + G   L +H RT+   YK  
Sbjct: 121 DIVKAVRDAVPAEIPVSAKIRLGFE-DKSLAIENAIAITEAGASELVVHARTKTEGYKPP 179

Query: 190 AEYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQ 247
           A +D I  +K    IP++ANG+I + E A+     +    LMIGR A   P +   I+
Sbjct: 180 AYWDWIAKIKQHTDIPLVANGEIWNAEDAQRCQSQSECTNLMIGRGALAMPNLAMSIK 237