Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., HTH-type transcriptional regulator GntR from Xanthobacter sp. DMC5

 Score =  209 bits (533), Expect = 6e-59
 Identities = 116/326 (35%), Positives = 179/326 (54%), Gaps = 2/326 (0%)

Query: 8   TLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSKAI 67
           T++DVA   GV+ MTVSR LR P  V A  + ++  A+   GYI N   + L+   S  I
Sbjct: 13  TMEDVARVAGVSAMTVSRVLRKPTLVNADLKARVEAAIRETGYIYNLVASSLASQRSGII 72

Query: 68  GILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLILT 127
            ++LP++++ IF   V+G+  V + +  + ++A   Y   EEE+ I +LL  + DG ++ 
Sbjct: 73  ALILPTVASSIFTDSVKGVSDVARTHAVQMIMAETNYSPAEEEKVIEALLRRRPDGFVIV 132

Query: 128 ESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIAYF 187
              HT+ T  ++  SGVPVVET +    PID  VG+ + +A     + ++A G R I + 
Sbjct: 133 GVSHTRATRALLEKSGVPVVETWDSTPTPIDSLVGLSNFDAMKAMTEALVAQGFRRIVFV 192

Query: 188 G-ARLDTRTKLRMQGYDQAMQEAGLPIKHVL-TGSHSSFSLAAQLLDEAFARYPDLDGVF 245
           G A  D R ++R +GY+  + EAGL    +L  G  +S      + +   A  P  D V 
Sbjct: 193 GTATPDRRAQMRAKGYEAGIAEAGLGAPLILNAGDLTSMESGRIIAERIAALRPRPDAVL 252

Query: 246 CTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSAEL 305
           C ND +A G LL  Q+ GI VP  ++V G+  LD    + P L++VD PRY +G+K+AE+
Sbjct: 253 CLNDVLAAGALLAFQRMGITVPADIAVAGFGGLDFSSHLNPSLSTVDIPRYEMGQKAAEM 312

Query: 306 LIAALKGERAEQQVVDMGYRFTAGES 331
           L+  + G  A+    +MGYR    ES
Sbjct: 313 LLGRIAGTAAQGGTCEMGYRIMLRES 338