Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  226 bits (576), Expect = 6e-64
 Identities = 124/328 (37%), Positives = 192/328 (58%), Gaps = 2/328 (0%)

Query: 6   RATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSK 65
           R TL +VA   GV+ +T SR LR   +VA    EK+  A   L Y+ N A   L+ + S 
Sbjct: 15  RPTLNEVARLAGVSPITASRALRGISTVATELVEKVQQAAAELKYVVNPAARALASAQSH 74

Query: 66  AIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLI 125
           ++ +L+PSLSN +F   ++ I  V +  G+E L+ +  Y  +EEE  + + +AYQ  GL+
Sbjct: 75  SVVVLVPSLSNLLFIETLEAIHQVLRPKGFEVLIGNSHYSRDEEENLLRNYMAYQPRGLL 134

Query: 126 LTESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIA 185
           LT    T+   +M+ +S VP V  M+L  N     VG   + A   A   +++ G++ +A
Sbjct: 135 LTGFDRTESARRMVEASNVPCVYMMDLDPNAGVNCVGFSQLAAGETAAAHLLSRGRKRLA 194

Query: 186 YFGARLDTRTKLRMQGYDQAMQEAGL--PIKHVLTGSHSSFSLAAQLLDEAFARYPDLDG 243
           Y GA+LD RT LR +G+ +A+Q+AGL  P   +LT   SS  L  +L  +  A +PD+D 
Sbjct: 195 YIGAQLDQRTLLRGEGFRRALQQAGLYDPALELLTPRPSSVGLGGELFLQLLAAHPDVDA 254

Query: 244 VFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSA 303
           +F  NDD+A G LL A + GI+VPE+++V+G+N L     + P+L+S+ +PR AIG ++A
Sbjct: 255 IFFGNDDLAQGALLEALRHGIKVPERVAVLGFNDLPASSFMVPRLSSISTPREAIGRRAA 314

Query: 304 ELLIAALKGERAEQQVVDMGYRFTAGES 331
           E L+  + G +  + VVDMG+     ES
Sbjct: 315 EQLLTIMAGNKIAKPVVDMGFELQVRES 342