Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  147 bits (371), Expect = 4e-40
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 12/308 (3%)

Query: 7   ATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSKA 66
           AT++DVA   G++  TVS  +     V+   R K+  A++ L Y+ +     L   ++  
Sbjct: 2   ATIKDVAALAGISYTTVSHVVNKTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTTAT 61

Query: 67  IGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLIL 126
           IG+L+P+  N  FA   +GIE   + NGY  +L +   + E++   +  LL  ++DGLI+
Sbjct: 62  IGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRNYLRVLLEKRIDGLIV 121

Query: 127 TESHHTQRTLQMIASSGVPVVETMELPANPIDM-AVGMDHVEASYQAVKKIIAAGKRSIA 185
           T        L    S+    +  ++   + ID+  V +DH E +Y A + ++  G R IA
Sbjct: 122 TSVGGDDSGLAAGLSAVRTPMVIVDRALDGIDVDLVRIDHEEGAYLATRHLLELGHRDIA 181

Query: 186 YFGARLDTR-TKLRMQGYDQAMQEAGLPIKHVLT-----GSHSSFSLAAQLLDEAFARYP 239
             G    TR  ++R+ GY +A++EAG+ +    T      S   ++ A QLL E      
Sbjct: 182 CIGGPAHTRVAQMRLAGYHRALREAGVTVAANRTQESDFTSTGGYTAAVQLLTE-----N 236

Query: 240 DLDGVFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIG 299
               +F +ND I  G L  A +R IRVP +LSVIG++ + +GR + P LT+V      +G
Sbjct: 237 PPSAIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLG 296

Query: 300 EKSAELLI 307
           E +AELL+
Sbjct: 297 ETAAELLL 304