Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., LacI family DNA-binding transcriptional regulator from Variovorax sp. OAS795

 Score =  192 bits (488), Expect = 1e-53
 Identities = 110/314 (35%), Positives = 178/314 (56%), Gaps = 8/314 (2%)

Query: 9   LQDVADQVGVTKMTVSRYLR----SPDSVAAATREKIALAVEALGYIENRAPAMLSKSSS 64
           + DVA +VGV+KMTVSR L     S  + + A R++I  A E +GY+ ++     S   S
Sbjct: 1   MADVAARVGVSKMTVSRALNRSTGSDRATSEALRQRILQACEEMGYVIDQTARTFSSKRS 60

Query: 65  KAIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGL 124
             + +L+PSL+N  F+   QGI A  +A G + LL +  Y  E EER + ++LA + +G+
Sbjct: 61  GFVAVLIPSLNNSNFSETAQGIAAALEARGLQLLLGYTDYRVETEERLVRAMLARRPEGV 120

Query: 125 ILTESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSI 184
           ILT   HT     M+ ++G+PVVET +LPA PI+  VG  + +A+   V+ +   G R I
Sbjct: 121 ILTGGAHTPAARAMLQAAGIPVVETWDLPATPIEHTVGFSNAQAAAAMVRHLHGQGYRRI 180

Query: 185 AYFG--ARLDTRTKLRMQGYDQAMQEAGLPIKHVLTGSHSSFSLA--AQLLDEAFARYPD 240
           A+ G  +  DTR   R +GY +A++E GLP   V++      S+A   + + +   ++PD
Sbjct: 181 AFIGGTSNRDTRGADRQRGYAEAIRELGLPDGRVISFGQPPISMAQGGEAVVQLIRQWPD 240

Query: 241 LDGVFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGE 300
           +D V C +D  A G L+  ++RG  VP ++++ G+   ++ R   P++T+V      IG 
Sbjct: 241 VDAVMCVSDLSAFGALMECKRRGWDVPGRIAIAGFGDFEVARASHPRITTVAVDCAGIGR 300

Query: 301 KSAELLIAALKGER 314
            + ELL+  + G R
Sbjct: 301 AAGELLLRVIDGAR 314