Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (371), Expect = 4e-40
 Identities = 89/308 (28%), Positives = 158/308 (51%), Gaps = 2/308 (0%)

Query: 7   ATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSKA 66
           AT++DVA   GV+  TVSR L +P+ V+++TR+++  AV   GY  N     L ++ SK 
Sbjct: 2   ATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKT 61

Query: 67  IGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLIL 126
           I  ++P + +  F+  ++GIE     +GY  LL   G  +  E   +  +   Q DG++L
Sbjct: 62  IVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLL 121

Query: 127 TESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIAY 186
             +       +    +  P+V   E         V +D++ ++++AV  +   G + IA 
Sbjct: 122 LGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQ 181

Query: 187 F-GARLDTRTKLRMQGYDQAMQEAGLPIKHV-LTGSHSSFSLAAQLLDEAFARYPDLDGV 244
             G +     + R QGY QA++ AG+ +     T    +F   A+ + +  A       +
Sbjct: 182 ISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTAI 241

Query: 245 FCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSAE 304
           FC ND +AIG +  A++ G+RVP+ LSV+G++ +   +   P LT++  PRY IG ++  
Sbjct: 242 FCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAML 301

Query: 305 LLIAALKG 312
           +++  L+G
Sbjct: 302 MMLELLRG 309