Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Transcriptional regulator, LacI family from Pseudomonas putida KT2440

 Score =  224 bits (572), Expect = 2e-63
 Identities = 123/328 (37%), Positives = 189/328 (57%), Gaps = 2/328 (0%)

Query: 6   RATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSK 65
           R TL +VA   GV+ +T SR LR   +VA    EK+  A   LGY+ N A   L+ + S+
Sbjct: 11  RPTLAEVARLSGVSPITASRALRGVSTVAPDLVEKVIAAAANLGYVANPAARALASARSQ 70

Query: 66  AIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLI 125
           ++ +L+PSLSNQ+F   ++ I  V +  G E L+ ++ YD  EEE  I + LAYQ  G++
Sbjct: 71  SVVVLIPSLSNQLFIDTLEAIHEVMRPRGLEVLIGNYHYDLAEEENLIRNYLAYQPCGIL 130

Query: 126 LTESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIA 185
           LT    +    QM+ +SGVP V  MEL   P  ++VG    +A   A + +I  G++ +A
Sbjct: 131 LTGFERSDAARQMLVASGVPCVHMMELNGEPGALSVGFSQHQAGRAAARHLIERGRKRLA 190

Query: 186 YFGARLDTRTKLRMQGYDQAMQEAGLPIK--HVLTGSHSSFSLAAQLLDEAFARYPDLDG 243
           +  A+LD R   R +G+ QA+ EAGL      VL    SS +L + L  +   + PD+DG
Sbjct: 191 FIAAQLDPRVMQRAEGFRQALAEAGLQAAELEVLAPEPSSIALGSVLFSQLMQQAPDVDG 250

Query: 244 VFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSA 303
           +F  NDD+A G +L A ++G+ VP Q++++G+N L     + P+LTS+ +PR A+G  +A
Sbjct: 251 IFFCNDDLAQGAVLQALRQGVEVPRQVAMVGFNDLPASAHMVPRLTSIRTPRAAVGRGAA 310

Query: 304 ELLIAALKGERAEQQVVDMGYRFTAGES 331
           + L+A L G+R      D+G+     ES
Sbjct: 311 QALLALLDGKRVTNAQQDLGFELMVRES 338