Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., HTH-type transcriptional regulator GntR from Pseudomonas lactucae CFBP13502

 Score =  228 bits (581), Expect = 2e-64
 Identities = 125/328 (38%), Positives = 191/328 (58%), Gaps = 2/328 (0%)

Query: 6   RATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSK 65
           R TL +VA   GV+ +T SR LR   +VA    EK+  A   L Y+ N A   L+ + S 
Sbjct: 14  RPTLNEVARLAGVSPITASRALRGISTVAVELVEKVQHAAAELNYVVNPAARALASAQSH 73

Query: 66  AIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLI 125
           ++ +L+PSLSN +F   ++ I  V +  G+E L+ +F Y  +EEE  + + +AYQ  GL+
Sbjct: 74  SVVVLVPSLSNLLFIETLEAIHQVLRPKGFEVLIGNFHYSRDEEENLLRNYMAYQPRGLL 133

Query: 126 LTESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIA 185
           LT    T+   +M+ +S VP V  M+L  N     VG   + A   A   +++ G++ +A
Sbjct: 134 LTGFDRTESARRMVEASNVPCVYMMDLDPNAGVNCVGFSQLAAGETAAAHLLSRGRKRLA 193

Query: 186 YFGARLDTRTKLRMQGYDQAMQEAGL--PIKHVLTGSHSSFSLAAQLLDEAFARYPDLDG 243
           Y GA+LD RT LR +G+ +A+Q+AG   P   +LT   SS  L  +L  +  A +PD+D 
Sbjct: 194 YIGAQLDQRTLLRGEGFRRALQQAGKYDPALELLTPRPSSVGLGGELFLQLLAAHPDVDA 253

Query: 244 VFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSA 303
           +F  NDD+A G LL A + GI VPE+++V+G+N L     + P+L+S+ +PR AIG +SA
Sbjct: 254 IFFGNDDLAQGALLEAMRHGINVPERVAVLGFNDLPASSFMVPRLSSISTPREAIGRRSA 313

Query: 304 ELLIAALKGERAEQQVVDMGYRFTAGES 331
           E L+  + G +  + VVDMG+     ES
Sbjct: 314 EHLLTIMAGNKIAKPVVDMGFELQVRES 341