Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., Transcriptional regulator, LacI family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  184 bits (466), Expect = 4e-51
 Identities = 111/332 (33%), Positives = 172/332 (51%), Gaps = 4/332 (1%)

Query: 2   TKKQRA-TLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLS 60
           TK  RA TL+DVA   G++ MTVSR L SP  V   T EK+  AV   GYI N     L+
Sbjct: 21  TKSPRAPTLEDVARSAGLSPMTVSRALNSPQLVRPKTVEKVMQAVRVTGYIPNALAGGLA 80

Query: 61  KSSSKAIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQ 120
              SK I +++P ++N +F   +Q +       GY  LL   GY E+ E   +A+LL+ +
Sbjct: 81  SRRSKLIAVVVPQINNNMFVDTIQSLSDELARRGYHILLCVAGYTEQTEAELVATLLSRR 140

Query: 121 VDGLILTESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAG 180
            DG++LT  HHT    ++I ++ +PVVE  +L   P+DM VG  H +      + +++ G
Sbjct: 141 PDGVVLTGIHHTIELKKVILNAAIPVVEIWDLTPTPLDMLVGFSHEKVGQATGEYLLSKG 200

Query: 181 KRSIAYFGARLDTRTKLRMQGYDQAMQEAGL-PIKHVLTGSHSSFSLAAQLLDEAFARYP 239
            R         D R   R QG    +Q   +  +  V     +S SL    L + F    
Sbjct: 201 YRRPGLLWT-ADRRAAQRKQGLCSVLQRHAIHAVPQVDVPLPASLSLGRSGLSQLFDE-G 258

Query: 240 DLDGVFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIG 299
             D + C++D +A G ++ A+ RG+R+P  L+VIG+  LD   +  P +T+V   R AIG
Sbjct: 259 TFDVIVCSSDTLAQGAMMEAESRGLRIPHDLAVIGFGDLDFAASNRPSITTVSVDRRAIG 318

Query: 300 EKSAELLIAALKGERAEQQVVDMGYRFTAGES 331
           +++A LL   ++ +   + +VD+G+     ES
Sbjct: 319 QRAATLLADRIEQKPCAEAIVDIGFHLIGRES 350