Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., DNA-binding transcriptional repressor, 5-gluconate-binding (NCBI) from Escherichia coli BW25113

 Score =  289 bits (739), Expect = 8e-83
 Identities = 145/331 (43%), Positives = 216/331 (65%), Gaps = 1/331 (0%)

Query: 3   KKQRATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKS 62
           +  R +LQD+A   GVTKMTVSRY+RSP  VA  T E+IA  +E + YI NRAP ML  +
Sbjct: 2   RNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNA 61

Query: 63  SSKAIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVD 122
            S  +GIL+PS  NQ+FA  + GIE+VT  + Y+TL+A++ YD + EE  + +LL+Y +D
Sbjct: 62  QSYTLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNID 121

Query: 123 GLILTESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKR 182
           G+IL+E +HT RT++ + S+ +PVVE M++    +DM VG D+ +A++  V  ++    R
Sbjct: 122 GIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLEKRVR 181

Query: 183 -SIAYFGARLDTRTKLRMQGYDQAMQEAGLPIKHVLTGSHSSFSLAAQLLDEAFARYPDL 241
             I Y G++ DTR + R QGY  AM    L    +   + SS  L  QL+ +A +  PDL
Sbjct: 182 HKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSANPDL 241

Query: 242 DGVFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEK 301
           DGVFCTNDDIA+G LL+ ++R + VPEQ+S+ G++ L+IGR + P L SV +PR+ IG  
Sbjct: 242 DGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRM 301

Query: 302 SAELLIAALKGERAEQQVVDMGYRFTAGESV 332
           +A++L++ +K        VD+GY+   G ++
Sbjct: 302 AAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL 332