Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., HTH-type transcriptional regulator GntR from Azospirillum sp. SherDot2

 Score =  215 bits (548), Expect = 1e-60
 Identities = 118/325 (36%), Positives = 181/325 (55%), Gaps = 2/325 (0%)

Query: 9   LQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSKAIG 68
           + DVA++VG++ +TVSR  + P+ V    R++I    +++GY+ N+A + L+ + S  + 
Sbjct: 1   MADVAERVGISAITVSRAFKRPELVMPELRQRILDTAQSMGYVPNQAASALASARSMTVA 60

Query: 69  ILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLILTE 128
           +L+PS++N +F   + GI  +    GY  L+    Y  EEEER I + L +Q DG++LT 
Sbjct: 61  VLIPSMTNMVFVETLAGIHDMLLPRGYRALIGVTHYSPEEEERLIRTYLQFQPDGILLTG 120

Query: 129 SHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIAYFG 188
           + HT      +++   P V  MEL  +P  ++VG    E        ++  G R I +  
Sbjct: 121 TDHTAVARTYLSALASPTVHMMELLDDPDSLSVGCSQEEGGRLMTTHLLERGYRRIGFVA 180

Query: 189 ARLDTRTKLRMQGYDQAMQEAGL--PIKHVLTGSHSSFSLAAQLLDEAFARYPDLDGVFC 246
            +LD RT  R+ GY  A++EAGL    +       SS  L A ++D   A   D D VF 
Sbjct: 181 VQLDPRTLARLDGYRHALEEAGLYDEARVWRLPDPSSIHLGAAMIDRLMAENTDCDAVFF 240

Query: 247 TNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSAELL 306
            NDD+A G L   Q+RGIRVP+QL+V G+N L      TP LT+V +PRYAIG  +A +L
Sbjct: 241 CNDDLAQGALFQCQRRGIRVPDQLAVAGFNDLPASAWTTPTLTTVATPRYAIGRHAAAML 300

Query: 307 IAALKGERAEQQVVDMGYRFTAGES 331
           +  + G+   Q+ +D+G  F A ES
Sbjct: 301 LDLMDGKEPPQRRLDLGLTFIARES 325