Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., HTH-type transcriptional regulator GntR from Azospirillum sp. SherDot2

 Score =  207 bits (526), Expect = 4e-58
 Identities = 113/317 (35%), Positives = 178/317 (56%), Gaps = 8/317 (2%)

Query: 5   QRATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSS 64
           QR T+ DVA    V+  TVS YLR P++V+    E+IA  ++ +GY+ N     L+ + S
Sbjct: 15  QRVTMTDVATAADVSASTVSLYLRRPEAVSRHLAERIARVIDEMGYVPNLVAGSLAAARS 74

Query: 65  KAIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGL 124
           + +G++LPS+ N  FA     ++ + +A  Y+TLL    +  EEEE  I + LA+    +
Sbjct: 75  RTVGVILPSILNSFFAETYNTLQGMFQAAHYQTLLGVSEFSPEEEESLIRAFLAWSPAAM 134

Query: 125 ILTESHHTQRTLQMIASSGVPVVETMELPANP---IDMAVGMDHVEASYQAVKKIIAAGK 181
           ++T  HHT+RT  M+AS GVPVVE  ++P +P   ++++VG  H E        +   G 
Sbjct: 135 VVTGFHHTERTRAMLASCGVPVVEMWDMPGHPGEAVNISVGFSHFEVGRMQTSHLYDQGS 194

Query: 182 RSIAYFG--ARLDTRTKLRMQGYDQAMQEAGL--PIKHVLTGSHSSFSLAAQLLDEAFAR 237
           R +AY G  A  D R + R  GY+  +   GL  PI   +  + ++  +   L+DE   R
Sbjct: 195 RKVAYIGAAAHQDLRVRSRTDGYEAEVMRRGLHDPIDFTVPDA-ATTEVGRWLIDEILTR 253

Query: 238 YPDLDGVFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYA 297
           + D+DGV C+ND +A+G L    +R ++VP+ L+V+G+  L    +  P LT+V  P+  
Sbjct: 254 HSDIDGVVCSNDALALGVLFEVTRRDLKVPDDLAVVGFGDLPFSSSCPPPLTTVRPPQRE 313

Query: 298 IGEKSAELLIAALKGER 314
           IG  SA  ++AAL G R
Sbjct: 314 IGRLSATQILAALDGVR 330