Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., HTH-type transcriptional repressor CytR from Azospirillum sp. SherDot2

 Score =  142 bits (358), Expect = 1e-38
 Identities = 87/308 (28%), Positives = 154/308 (50%), Gaps = 5/308 (1%)

Query: 11  DVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSKAIGIL 70
           DVA    V+  TVSR   +P+ VA A RE++    +A+G++ + A + L++  +  +G +
Sbjct: 25  DVAAAAEVSIATVSRVFNNPEKVAPAIRERVLATAKAMGWMPHAAGSALARRRTSIVGAV 84

Query: 71  LPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLILTESH 130
           +P+L N++FA+ V  ++A     G   LL+ F YD+++    + ++LA  V+ L +    
Sbjct: 85  IPTLDNEVFAAQVGAMQAAFADRGITLLLSCFNYDQDQAAHDVQAMLARGVEALAIVGEA 144

Query: 131 HTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIAYF--G 188
           H       I +  +P V T     +     +G D+ +A +   + ++  G  +I      
Sbjct: 145 HRPDLFASIQARHIPYVVTYSHRPDSPHPCIGFDNRQAFHSIARHLLDLGHETIGVIIQP 204

Query: 189 ARLDTRTKLRMQGYDQAMQEAGLPIK--HVLTGSHSSFSLAAQLLDEAFARYPDLDGVFC 246
              + R   R+ G  +A+ + GL I+  H+  G   S     Q +    A  P    V C
Sbjct: 205 TAGNDRVAARLDGVREALAQRGLGIRPQHLCEGEW-SIDFGRQSVRAMLATDPPPTAVIC 263

Query: 247 TNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSAELL 306
            ND +A+G LL A+  G+ VP  LS+ G++ + I R + P LT++    + IG ++A  L
Sbjct: 264 GNDYLALGALLEARAMGLTVPHDLSITGFDDIAISRQLDPPLTTMHVDNHEIGRRAAAYL 323

Query: 307 IAALKGER 314
           +A L+G R
Sbjct: 324 LACLEGSR 331