Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

 Score =  185 bits (470), Expect = 1e-51
 Identities = 104/322 (32%), Positives = 178/322 (55%), Gaps = 11/322 (3%)

Query: 21  MTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSKAIGILLPSLSNQIFA 80
           MTVSR L  P  V+  TR+K+  A+E LGY+ +R    LS   +  I  +LP+L+N  FA
Sbjct: 1   MTVSRVLADPALVSEDTRQKVMKAIEKLGYVPDRIAGSLSSRRTNFITAILPTLTNSNFA 60

Query: 81  SFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLILTESHHTQRTLQMIA 140
              QG+    +A  Y+ L+ +  YD  EEER I +++  + D +++  + HT+   +++ 
Sbjct: 61  DSAQGLANALRAADYQLLIGYTMYDLLEEERVIRTMMERRPDAIVVAGTVHTKMASEVLM 120

Query: 141 SSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIAYFGARL-----DTRT 195
            +G+P+VE  ++P +PID AVG  + E    A K +I+ G   I   G+R      D R 
Sbjct: 121 RAGIPIVEIWDVPEHPIDHAVGFSNYEVGRTAAKHLISLGFTKIGALGSRADGDVKDWRG 180

Query: 196 KLRMQGYDQAMQEAGLPIKHVLTGSHS--SFSLAAQLLDEAFARYPDLDGVFCTNDDIAI 253
           + R+ G+  A++EAG+    ++    +  S+   A+ L    A+ PD++ +F  +D  A+
Sbjct: 181 ESRLLGFSAALREAGISDDLIIREGSAPVSYDHGAKTLGSLLAKAPDVEAIFAVSDISAV 240

Query: 254 GTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSAELLIAALKGE 313
           G L+   +RGI VP+++S++G+   DIGR   P ++++      IG K+ ELL++ L+ E
Sbjct: 241 GALMECHRRGIHVPDRISILGFGDFDIGRQCYPAISTIRVDAQMIGRKAGELLLSILEPE 300

Query: 314 R----AEQQVVDMGYRFTAGES 331
           +     E   VD+G+     E+
Sbjct: 301 KDAVVPEGARVDVGFELIVRET 322