Pairwise Alignments

Query, 458 a.a., permease from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., permease DsdX from Pseudomonas simiae WCS417

 Score =  278 bits (711), Expect = 3e-79
 Identities = 157/452 (34%), Positives = 257/452 (56%), Gaps = 17/452 (3%)

Query: 13  LLTVAAVAIIALLLLIIRFKIHAFASLTLVSLGTAIATGVASDKVVSTMMTGFGGTLASV 72
           LL  AA+AIIAL++LI R++++ F  +TLVS+G A+  G+ +D ++ +   G G TL  +
Sbjct: 27  LLAYAAIAIIALIVLIARYRLNPFIVITLVSIGLALMAGMPADTIMGSYEAGVGKTLGHI 86

Query: 73  ALLVGLGAMIGKILEVTGGAKVLADTLIGRFGEQRAPFALGVASLLFGFPIFFDAGLIVM 132
           AL+V LG M+GK++  +GGA+ +A TLI RFGE+ A +A+   + L G P+FF+ G +++
Sbjct: 87  ALVVALGTMLGKMMAESGGAEQVARTLINRFGERNAHWAMVCIAFLVGLPLFFEVGFVLL 146

Query: 133 MPIIFSVAKRFGGSPLKYALPSAGAFAVMHAFVPPHPGPVAAAELLGANIGLLLIVGLLV 192
           +PI F+VA+R G S L   LP     +V+HA VPPHP  + A     A++G  ++  +L+
Sbjct: 147 VPIAFTVARRVGVSILMVGLPMVAGLSVVHALVPPHPAAMMAVLAYNASVGQTVLYAILI 206

Query: 193 AIPTWYLGAYLFGLYAGKKFDI----PLSKAFFNTDAIIDEAKLPKFATVMTILVLPVLL 248
            IPT  +   ++  +   +  +    PL + F + +      +LP F   M  ++LPV+L
Sbjct: 207 GIPTAIIAGPVYAKFIVPRIHLPAENPLERQFIDRE---PRTRLPSFTLTMGTILLPVVL 263

Query: 249 IFMDTGLNTLAVAGMIDGKAPAVEFLRMLGKTPIALLITLLVCI--AAFAKDYGMARLEK 306
           + +    N ++  G     +   +FL  +G + IALL+  LV       A+ +    + K
Sbjct: 264 MMIGGWANVISSPG-----SAFNQFLLFIGNSVIALLVATLVSFWTLGIAQGFNRESILK 318

Query: 307 LCGDSLAPICAVILVTGAGGMFGGVLRASGIGSALAGVLSDTGMPVVVAAFVIATCLRVA 366
              + LAP  ++ L+ GAGG    +L  +G+ + + G+     +  +V  ++ A  +R+A
Sbjct: 319 FTNECLAPTASITLLVGAGGGLNRILVDAGVTNEILGLAHAFQLSPLVMGWLFAALMRIA 378

Query: 367 QGSATVALTTTAALIAPTVAATTGLSDLDLCFIVISIAGGATVLSHFNDSGFWLVSRLME 426
            GSATVA+TT + ++AP VA   G    +L  +V++   G+ + SH ND GFWL+     
Sbjct: 379 TGSATVAMTTASGVVAP-VAMGLGYPHPEL--LVLATGAGSVIFSHVNDGGFWLIKEYFN 435

Query: 427 MDEKTTLKTWTVMETLLGGIAFLIVATLSFIL 458
           M    T KTWTV+ETL+  +AF +   LS IL
Sbjct: 436 MTVIQTFKTWTVLETLISVVAFGLTYGLSCIL 467