Pairwise Alignments

Query, 458 a.a., permease from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., D-serine permease DsdX from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  203 bits (516), Expect = 1e-56
 Identities = 135/450 (30%), Positives = 225/450 (50%), Gaps = 13/450 (2%)

Query: 12  YLLTVAAVAIIALLLLIIRFKIHAFASLTLVSLGTAIATGVASDKVVSTMMTGFGGTLAS 71
           ++++   ++I+ ++L I++FK H F +L L S       G+   ++V+ +  G GGTL  
Sbjct: 6   WVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGMGPLEMVTAIENGIGGTLGF 65

Query: 72  VALLVGLGAMIGKILEVTGGAKVLADTLIGRFGEQRAPFALGVASLLFGFPIFFDAGLIV 131
           +A ++GLG ++GK++EV+G A+ +  TL  R     A   + +  L+ G  +F + G+++
Sbjct: 66  LAAVIGLGTILGKMMEVSGAAERIGLTL-QRCRWLSADVIMVLVGLICGITLFVEVGVVL 124

Query: 132 MMPIIFSVAKRFGGSPLKYALPSAGAFAVMHAFVPPHPGPVAAAELLGANIGLLLIVGLL 191
           ++P+ FS+AK+   S LK A+P   A   +H  VPPHP  +  A  LGA+IG +++ GLL
Sbjct: 125 LIPLAFSIAKKTHTSLLKLAIPLCTALMAVHCVVPPHPAALFVANKLGADIGSVIVYGLL 184

Query: 192 VAIPTWYLGAYLFGLYAGKKFDIPLSKAFFNTDAIIDEAKLPKFATVMTILVLPVLLIFM 251
           V +    +G  LF  + G +         F    +  E  LP     +  ++LP+ L+  
Sbjct: 185 VGLMASLVGGPLFLKFLGNRLPFKPVPTEFADLEVRAENTLPSLGATLFTVLLPIGLML- 243

Query: 252 DTGLNTLAVAGMI-DGKAPAVEFLRMLGKTPIALLITLLVC--IAAFAKDYGMARLEKLC 308
              + T+A   M  DG       L  +G    A+ I + V   I    +  GM  L    
Sbjct: 244 ---VKTVAELNMAKDG--TLYTLLEFIGNPITAMFIAVFVAYYILGLRQHMGMGTLLTHT 298

Query: 309 GDSLAPICAVILVTGAGGMFGGVLRASGIGSALAGVLSDTGMPVVVAAFVIATCLRVAQG 368
            +    I  ++L+ GAGG F  +L++SG+   LA +LS+  M  ++ A+++A  L  A G
Sbjct: 299 ENGFGAIANILLIIGAGGAFNAILKSSGLADTLAVILSNMHMHPILLAWLVALILHAAVG 358

Query: 369 SATVALTTTAALIAPTVAATTGLSDLDLCFIVISIAGGATVLSHFNDSGFWLVSRLMEMD 428
           SATVA+    A++AP +       D+    I I+I  GA   +   DS FWLV +     
Sbjct: 359 SATVAMMGATAIVAPMLPL---YPDVSPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGAT 415

Query: 429 EKTTLKTWTVMETLLGGIAFLIVATLSFIL 458
              T K +T    +   +A      LSFI+
Sbjct: 416 LNETFKYYTTATFIASVVALAGTFLLSFII 445