Pairwise Alignments

Query, 458 a.a., permease from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  202 bits (515), Expect = 1e-56
 Identities = 132/451 (29%), Positives = 226/451 (50%), Gaps = 15/451 (3%)

Query: 12  YLLTVAAVAIIALLLLIIRFKIHAFASLTLVSLGTAIATGVASDKVVSTMMTGFGGTLAS 71
           ++++   ++I+ ++L I++FK H F +L L S       G+    +V+ + +G GGTL  
Sbjct: 6   WVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGF 65

Query: 72  VALLVGLGAMIGKILEVTGGAKVLADTLIGRFGEQRAPFALGVASLLFGFPIFFDAGLIV 131
           +A ++GLG ++GK++EV+G A+ +  TL  R         + +  L+ G  +F + G+++
Sbjct: 66  LAAVIGLGTILGKMMEVSGAAERIGLTL-QRCRWLSVDVIMVLVGLICGITLFVEVGVVL 124

Query: 132 MMPIIFSVAKRFGGSPLKYALPSAGAFAVMHAFVPPHPGPVAAAELLGANIGLLLIVGLL 191
           ++P+ FS+AK+   S LK A+P   A   +H  VPPHP  +  A  LGA+IG +++ GLL
Sbjct: 125 LIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLL 184

Query: 192 VAIPTWYLGAYLFGLYAGKKFDIPLSKAFFNTDAIIDEAKLPKFATVMTILVLPVLLIFM 251
           V +    +G  LF  + G++         F    + DE  LP     +  ++LP+ L+ +
Sbjct: 185 VGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLV 244

Query: 252 DT--GLNTLAVAGMIDGKAPAVEFLRMLGKTPIALLITLLVC--IAAFAKDYGMARLEKL 307
            T   LN    +G+       VEF   +G    A+ I + V   +    +   M  +   
Sbjct: 245 KTIAELNMARESGLY----ILVEF---IGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTH 297

Query: 308 CGDSLAPICAVILVTGAGGMFGGVLRASGIGSALAGVLSDTGMPVVVAAFVIATCLRVAQ 367
             +    I  ++L+ GAGG F  +L++S +   LA +LS+  M  ++ A+++A  L  A 
Sbjct: 298 TENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAV 357

Query: 368 GSATVALTTTAALIAPTVAATTGLSDLDLCFIVISIAGGATVLSHFNDSGFWLVSRLMEM 427
           GSATVA+    A++AP +       D+    I I+I  GA   +   DS FWLV +    
Sbjct: 358 GSATVAMMGATAIVAPMLPL---YPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGA 414

Query: 428 DEKTTLKTWTVMETLLGGIAFLIVATLSFIL 458
               T K +T    +   +A      LSFI+
Sbjct: 415 TLNETFKYYTTATFIASVVALAGTFLLSFII 445