Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  253 bits (645), Expect = 2e-71
 Identities = 142/363 (39%), Positives = 224/363 (61%), Gaps = 3/363 (0%)

Query: 197 LVMQRLSSILVWVVGTLLVL---IVLASLIGRSITQPCEETLATLKNIAQGEGDLTRQLT 253
           L  QR + I    +  LL+    +++  L+G  I +P ++ +A L +IAQGEGDLTR+LT
Sbjct: 350 LEAQRKTDIFGMTIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLT 409

Query: 254 VTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAV 313
               DEL  IA  FN F  K++ +I ++    + V+ S++    +A   +   + Q   +
Sbjct: 410 SDRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEI 469

Query: 314 DTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTE 373
           D VA+A++++ A+ Q+VA++A QA QAA  A+QAASQG  ++  TST + +L +++ +  
Sbjct: 470 DQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAV 529

Query: 374 QETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAT 433
              Q LA ++++++A+L  IRG+AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA 
Sbjct: 530 SVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQ 589

Query: 434 RTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILS 493
           +TQ +T EI+ +I QLQ+  + V + M  +Q ++  + Q A +A + L  I   +  I  
Sbjct: 590 KTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVIND 649

Query: 494 FNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAV 553
            N  IA A+ +QS   ++I RN+  I + + + +  A++ +AAS  L +  +   R +  
Sbjct: 650 MNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQ 709

Query: 554 FKI 556
           FK+
Sbjct: 710 FKV 712