Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  224 bits (572), Expect = 6e-63
 Identities = 147/493 (29%), Positives = 248/493 (50%), Gaps = 20/493 (4%)

Query: 69  LLEHYAQQATQGTLTT-----EQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPD 123
           L+   A  +TQGT +      + +  T    I  L +G   Y ++  A   +++HP K +
Sbjct: 152 LIISVATPSTQGTQSIGVVGGDLSLQTLVDNIGALNFGGMGYAFLVSADGKVLVHPDK-N 210

Query: 124 LNGKDLRSFKDPNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGW 183
           L  K L      N   +  +   V    +  +V +         P+  +  V       W
Sbjct: 211 LVMKTLADVYPKNTPKISADFSEVEANGKDNIVTFI--------PIKGLPSVN------W 256

Query: 184 IIGTGIYVDDVNALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQ 243
            +G  +  D   A++ +  +S ++     ++++I L  ++ R + QP       +++IA 
Sbjct: 257 DLGISVDKDKSFAMLSEFRTSAVIATFIAVVIIIALLGMLIRILMQPLHLMTRAMQDIAD 316

Query: 244 GEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSAS 303
           GEGDLTR+LT+   DE   +  AFN F  +I   I+E++  TE V   A  +   + S+ 
Sbjct: 317 GEGDLTRRLTIQNHDEFGMLGNAFNRFVERIHTSIREVSSATEHVNEVALRVVSASNSSM 376

Query: 304 SKAYDQHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQ 363
             + +Q    ++VA+A+NQL A+ QE+A++A QA   A  A   A  G++++      M 
Sbjct: 377 VNSDEQANRTNSVAAAINQLGAAAQEIARNAAQASHQASDARHLAEDGQQVVERNIKAMN 436

Query: 364 SLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAV 423
            L   ++ +    + L S+T ++  +LEVI  +++QTNLLALNAAIEAARAGE GRGFAV
Sbjct: 437 QLSSMISASSSNIEALNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAV 496

Query: 424 VADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNE 483
           VADEVR LA RTQ S  +++++I +LQ  A+    +M ++Q+ S  +   A  A + LN 
Sbjct: 497 VADEVRNLAHRTQESAQQVQKMIEELQVGARESVSTMGESQRHSLESVDIANLAGERLNS 556

Query: 484 IEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMEN 543
           +  +I  I   NQ +A A+ +Q+   + I  ++T+I   + +          A   L + 
Sbjct: 557 VTQRIGEIDGMNQSVATATEEQTSVVESINMDITEINTLNQEGVENLQSTLRACADLEQQ 616

Query: 544 GQHLARSLAVFKI 556
              L + +  F+I
Sbjct: 617 AARLKQLVGSFRI 629