Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  270 bits (690), Expect = 1e-76
 Identities = 173/553 (31%), Positives = 294/553 (53%), Gaps = 17/553 (3%)

Query: 19  LSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQH-LVESAYTLLEHYAQQA 77
           L+IR RL++L++V L+ +A+            L  E+   T+  ++E     L+ Y Q A
Sbjct: 3   LTIRQRLYILSLVPLLTIALSMMYFTFSETRLLSQEQMRNTREAMMEMKQAELKSYLQIA 62

Query: 78  TQGTLTTEQAQNTAKQAIAQLR---YGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKD 134
                  +  Q     AIA LR   +G + Y +  D++   ++     +  G +  + +D
Sbjct: 63  DTALAPLKARQAPLDDAIAILREIQFGQSGYIFGYDSKGTRLLLGKATNGLGDNFMNMQD 122

Query: 135 PNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDV 194
             G  L  +++   + NQ     Y +PKPG + P+ K+SY      W   IGTG Y DDV
Sbjct: 123 TQGNYLIQDLLKNAKLNQ--FTTYYFPKPGEQTPLPKLSYSVYLPQWDLTIGTGFYTDDV 180

Query: 195 NALVMQ-------RLSSILVWVVGTLLVLIVLAS----LIGRSITQPCEETLATLKNIAQ 243
           +A + +       +L   L  + G  L++++L S    +I RSI +P E    ++ + A 
Sbjct: 181 DAEIAEMEARAEEQLEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSFAS 240

Query: 244 GEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSAS 303
           G+ DLT ++      E  +++  FN F   +++II+ +  + + V    + ++Q A    
Sbjct: 241 GDADLTARMEKFSVPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRATQVD 300

Query: 304 SKAYDQHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQ 363
             A +Q +  + VA+AM ++  + QE++ +A+ A Q+A  A   A+    ++   +  +Q
Sbjct: 301 HLASNQREETEQVATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARSVQ 360

Query: 364 SLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAV 423
           +L +++         L  +  ++++ L VI+ +AEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 361 ALAEEVADASSVIAKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGFAV 420

Query: 424 VADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNE 483
           VADEVR LA+RTQ ST +I  +I QL+  + +  ++M  +QQ+S  T ++A  A + L +
Sbjct: 421 VADEVRKLASRTQESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEALQK 480

Query: 484 IEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMEN 543
           I+A I TI+  N  IA A+ +QS    EI++ +  I++ S++++  ANQ    S+ L   
Sbjct: 481 IQASIGTIMDMNALIATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQGSQTLNGR 540

Query: 544 GQHLARSLAVFKI 556
              L   +A FK+
Sbjct: 541 AHELYELVARFKV 553