Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  280 bits (717), Expect = 8e-80
 Identities = 180/544 (33%), Positives = 293/544 (53%), Gaps = 10/544 (1%)

Query: 14  VSLRHLSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEHY 73
           + L ++ +  +L  + +V +V       I     + +L+ E++ + + +++S  + + + 
Sbjct: 2   LKLENIKVSYKLAAIVIVGIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAYL 61

Query: 74  AQQATQGTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRS-F 132
            Q     TL  EQAQ  AK  I  LR+  N+Y ++ D     V+HP++ DL G+ + +  
Sbjct: 62  NQ-----TLPKEQAQEQAKALINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPG 116

Query: 133 KDPNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVD 192
           KD  G+  F  M+++ +  QQG + Y W K     P DK+S+V  F PWGWI+G+G+ +D
Sbjct: 117 KDTEGQFWFT-MIDLARNGQQGSLIYPW-KNQQGNPADKLSFVNGFAPWGWILGSGMLLD 174

Query: 193 DVNALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQGEGDLTRQL 252
           D+   V Q+   +    +   LV+I L  +I R++ QP +     +K +AQG  DLT Q+
Sbjct: 175 DIEHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQG--DLTAQI 232

Query: 253 TVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQA 312
            V GKDEL  +AQ  N     +   + E      SV  +A  +   A+  S     Q   
Sbjct: 233 PVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQ 292

Query: 313 VDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRT 372
           +  +A+AMNQ+ A+  +VA  A    +    A++ A+ G + +  +   +++L  +L   
Sbjct: 293 LSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVA 352

Query: 373 EQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA 432
             +   L      +S V  VI G++EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA
Sbjct: 353 TDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLA 412

Query: 433 TRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTIL 492
           +RT  ST+EI+ +I +LQ+ A S + +M ++Q  +  +   AE A   L+ I   I+ + 
Sbjct: 413 SRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVS 472

Query: 493 SFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLA 552
                IA A+ +QS   +E+ RN++ I + + + S  A  +A  SE+L +  + L + L 
Sbjct: 473 DKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLT 532

Query: 553 VFKI 556
            FK+
Sbjct: 533 AFKL 536