Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  233 bits (593), Expect = 2e-65
 Identities = 146/568 (25%), Positives = 281/568 (49%), Gaps = 49/568 (8%)

Query: 19  LSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQT-QHLVESAYTLLEHYAQQA 77
           L I  +++ L  +++  L +  A+      H+ ++E + Q  + +++S+ +++E +  +A
Sbjct: 27  LGIGGKIWALVALLVAGLGL-LAVQSLSSTHETLIEDRRQALKQVLDSSASVVESFRARA 85

Query: 78  TQGTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKDPNG 137
            +G  + EQ +  A + +   RYG NDY +IN      +MHP++P++ G+D    KDPNG
Sbjct: 86  AKGEFSEEQGKRLAMETLRAWRYGNNDYVFINSYDMRPLMHPLRPEMEGQDQSEMKDPNG 145

Query: 138 KALFVEMVNVTQRNQ-QGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDVNA 196
             +   M+ V +     G   Y W +   + PV K+ YV  +KPW W++GTG+Y+DD++ 
Sbjct: 146 VYVTRAMIEVARSPAGAGFTSYHWARVKDKPPVPKLVYVINYKPWNWVLGTGVYIDDIDE 205

Query: 197 LVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQGEGDLTRQLTVTG 256
               +   +        ++  V+A LI RSIT P  + ++ ++ +A  EGD+ RQ+  TG
Sbjct: 206 AYAAKALDLGTKAALLGVLAAVIAVLIARSITGPLGQLVSRMRALA--EGDIERQVEGTG 263

Query: 257 -KDELAQIAQAFNLFTNKIRH---IIQE-------------------ITPITESVTGSAD 293
            KDE+  +A+A  +F    R    ++ E                      +   V  + D
Sbjct: 264 RKDEIGALARAMEVFRGNARENRRLLDEQEQLKLAAAQERNRTLRDMAEGLERRVKSAVD 323

Query: 294 ELTQVAQSASSKAYDQHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGRE 353
            +  V Q  +  +    Q  D  +     + A+ Q+ + +      AA   + + ++   
Sbjct: 324 AINNVGQRLNGASSAMTQTADQTSEQTGAVVAATQQTSTNVQTVASAAEELSASGNEISR 383

Query: 354 MITLTSTQMQSLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAAR 413
            ++LT+   ++  ++ ++T      LA+    +  V+++I  +A QTNLLALNA IEAAR
Sbjct: 384 QVSLTADIARAAAEEASQTNGMVAALAAAAGRIGEVVQLIDAIAGQTNLLALNATIEAAR 443

Query: 414 AGEQGRGFAVVADEVRTLATRTQASTNEIEQIIAQLQKKA-------QSVSQSMTQTQQQ 466
           AGE G+GFAVVA EV+TLA +T  +T EI   IA +Q +        + + +++T+  + 
Sbjct: 444 AGEAGKGFAVVAGEVKTLANQTAKATQEITTQIAAVQTETTRAVAAIRHIGETITRVDEA 503

Query: 467 SRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQA 526
           +       E+    ++EI   ++              + +  T E+T +++++++ +  +
Sbjct: 504 TSSIASAVEEQNAAIHEITRSVQ--------------EAARGTREVTEHISRVSDGARTS 549

Query: 527 SAQANQVAAASEQLMENGQHLARSLAVF 554
            + A +VA ++ +++     L R +  F
Sbjct: 550 KSAAEEVAGSAREMVTQNGTLTREIDGF 577