Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  231 bits (590), Expect = 5e-65
 Identities = 134/417 (32%), Positives = 233/417 (55%), Gaps = 4/417 (0%)

Query: 141 FVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKP-WGWIIGTGIYVDDVNALVM 199
           F ++ +    N+ G+V   W     E  V    + +L  P   W +G  I    +++ + 
Sbjct: 260 FGKLASNIAANESGIVHVTWK---GEDYVAVFEHAQLTNPQMNWSLGILIPASIIDSPIN 316

Query: 200 QRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQGEGDLTRQLTVTGKDE 259
             +++ ++     + ++ ++       +TQP  E    +  IA G+GDLT++L V   DE
Sbjct: 317 NAITTAIIVAFVIIGLIALITYFASAKVTQPLVEMRNAMAEIAHGDGDLTKRLEVKSNDE 376

Query: 260 LAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVDTVASA 319
           +  +A  FN FT+K+R ++++    T++V+ +AD L  V+ + S +   +   VD V++A
Sbjct: 377 IGALAIEFNTFTDKLRSLLKDTAANTKAVSDAADHLRDVSHATSKEINQERSQVDNVSTA 436

Query: 320 MNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVL 379
           + Q+ A+  E++++A Q+  AA  A++    G E +     ++++L D +++  +    L
Sbjct: 437 VTQMAATVVEISKNAAQSSDAATKADELVQAGSEQVQDAMREIRALADAISQGVEVVGGL 496

Query: 380 ASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQAST 439
           + E+ S+ AV++VI  +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ ST
Sbjct: 497 SKESDSIGAVVDVINSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQEST 556

Query: 440 NEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIA 499
            +I +++ +LQ  ++  +  M + Q +S+    + E+  + L +I   I  +   + HIA
Sbjct: 557 TDIRKMVERLQAMSEQTNSVMQEGQTRSQSGVDKTEKVVETLKDITQSIGLVHEQSTHIA 616

Query: 500 GASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVFKI 556
            A+ QQ+E   +I ++L  I   S + S  A ++A  + QL      L   +  FKI
Sbjct: 617 LATEQQTEVAQDINKSLVAITGLSDKTSQHAEELAVEATQLSAVSGDLKELVGQFKI 673