Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  394 bits (1011), Expect = e-114
 Identities = 212/525 (40%), Positives = 325/525 (61%), Gaps = 3/525 (0%)

Query: 16  LRHLSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEHYAQ 75
           LR  S+  RL ++  +I +L  +  A+++  +   L  +   + QHLVE  +T+L  +A 
Sbjct: 3   LRKFSLIQRLGIIVALITLLFVLLTAVVLNRHYEALKQKSYDENQHLVEVVHTMLSSFAA 62

Query: 76  QATQGTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKDP 135
           +      T +Q    A +A+  LRY  ++YFWI D  P+MVMHP+KP L+G+DLR+FKD 
Sbjct: 63  RTDVDEATAKQQ---ALEAVKALRYDGSNYFWIQDQTPSMVMHPIKPALDGQDLRTFKDG 119

Query: 136 NGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDVN 195
           NGKA F+EM    +   +G V+Y WP PG E P DK+SYVK FKPWGW +G+GIY+ ++ 
Sbjct: 120 NGKAFFIEMAQKVKSKGEGFVDYVWPLPGEESPTDKISYVKEFKPWGWTVGSGIYLTNLE 179

Query: 196 ALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQGEGDLTRQLTVT 255
                  + I V+ + ++++++VL  +IG SI +P +E    +K+I+QGEGDLTR L  T
Sbjct: 180 KEFAHLRNVIAVFCLVSIVLVVVLVYVIGGSIVKPVQEVSERMKDISQGEGDLTRSLPET 239

Query: 256 GKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVDT 315
           G+DE+ ++A+ FN +T K+RH +  I     S+T  A+ +   +++++++A  Q++ +  
Sbjct: 240 GQDEVTRLARYFNEYTEKMRHSLLGIRENINSLTQQAELVETSSKNSNAQAQTQNENMLQ 299

Query: 316 VASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQE 375
           VA+AM ++     EV+ +A  AE++  SA      G  ++  T   ++SL   +      
Sbjct: 300 VAAAMEEMTTQINEVSNNADSAEKSTSSARGNVQNGASVVDSTVNDIRSLTSDIESVSSA 359

Query: 376 TQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATRT 435
              LA++T+S+ AVL+VIRG+AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA+RT
Sbjct: 360 VTELAAQTESIGAVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRT 419

Query: 436 QASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSFN 495
             ST+EI+ +I +LQ  A+S   ++  +Q  S  T   A QA Q L E +  +  I   +
Sbjct: 420 GQSTDEIQAMIEKLQSNAKSAVDAVKVSQSASTKTVDNAIQANQNLQEADRLMTEIADMS 479

Query: 496 QHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQL 540
             IA A+ QQ+EA  E    +  ++  +  +   A+++AAAS+ L
Sbjct: 480 SEIARATEQQAEAATEANMRINALSGAADSSLRTADELAAASQAL 524