Pairwise Alignments

Query, 711 a.a., lysine decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 751 a.a., lysine decarboxylase from Pseudomonas simiae WCS417

 Score =  560 bits (1442), Expect = e-163
 Identities = 290/659 (44%), Positives = 415/659 (62%), Gaps = 26/659 (3%)

Query: 77  LPVHAFANEQSTLDISLTDLRLNVHFFEYALGMADD----IAIKINQATQEYKDAIMPPF 132
           LP+ A   EQ TL+ +  D    ++     L + +D    +A ++ +A + Y D ++PPF
Sbjct: 93  LPIFALG-EQVTLENAPADAMSELNQLRGILYLFEDTVPFLARQVARAARTYLDGLLPPF 151

Query: 133 TKALFKYVEEGKYTFCTPGHMGGTAFQKSPVGSIFYDFYGPNTFKADVSISMPELGSLLD 192
            KAL ++  +  Y++ TPGH GG A++KSPVG  F+ F+G NT ++D+S+S+PELGSLLD
Sbjct: 152 FKALVQHTADSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLD 211

Query: 193 HSGPHKEAEEYIARTFNADASYIVTNGTSTSNKIVGMFSAPAGSTVLVDRNCHKSLTHLM 252
           H+GP  EAE   AR F AD ++ V NGTST+NKIV          VLVDRNCHKS+ H +
Sbjct: 212 HTGPLAEAEARAARNFGADHTFFVINGTSTANKIVWHSMVGRDDLVLVDRNCHKSVLHSI 271

Query: 253 MMTDVTPIYFRPTRNAYGILGGIPQNEFSREVIAEKVANTPGASAP----SYAVITNSTY 308
           +MT   P+Y  P RN  GI+G IP +EFS E I  K+  +P           AV+TNSTY
Sbjct: 272 IMTGAIPLYLCPERNELGIIGPIPLSEFSPESIRAKIDASPLTRGRPPKVKLAVVTNSTY 331

Query: 309 DGLLYNTQFIKESL--DCKHIHFDSAWVPYTNFNRIYEGKCGMSGEAMPGK-VFYETQST 365
           DGL YN + IK+ L    + +HFD AW  Y  F+  + G+ GM     P   + + T ST
Sbjct: 332 DGLCYNAELIKQQLGNSVEVLHFDEAWYAYAAFHEFFAGRYGMGTSRTPDSPLVFTTHST 391

Query: 366 HKLLAAFSQASMIHVKG----EFDRESFNEAFMMHTSTSPQYGIVASTETAAAMMRGNTG 421
           HKLLAAFSQASMIHV+     + DR+ FNEAFMMH STSPQY I+AS + A+AMM G  G
Sbjct: 392 HKLLAAFSQASMIHVQDGGARQLDRDRFNEAFMMHISTSPQYSIIASLDVASAMMEGPAG 451

Query: 422 RKLMQDSIDRAIRFRKEIKRLKGE--SEGWFFDVWQPENIE-----TTECWKLDPNQDWH 474
           R L+Q+  D A+ FR+ +  L+     E W+F +WQP ++       T  W L P  DWH
Sbjct: 452 RSLLQEMFDEALSFRRALANLRQHIAEEDWWFSIWQPPSVAGIDRVVTADWLLHPQDDWH 511

Query: 475 GFKNLDDNHMYLDPIKITLLTPGMSKDGELEQSGIPASLVSKYLDEHGIVVEKTGPYNLL 534
           GF ++ ++++ LDPIK+TL+ PG++  G L   GIPA++VSK+L E G+VVEKTG Y+ L
Sbjct: 512 GFGDVAEDYVLLDPIKVTLVMPGLTAGGALSDCGIPAAVVSKFLWERGLVVEKTGLYSFL 571

Query: 535 FLFSIGIDKSKAMQLLRGLTEFKRGYDLNLTIRTMLPSLYREDPVFYEGMRIQELAQGIH 594
            LFS+GI K K   LL  L EFKR YD N+++ + LPS++ + P  Y+G+ +++L   +H
Sbjct: 572 VLFSMGITKGKWSTLLTELLEFKRSYDANVSLASCLPSVFAQGPTRYQGLGLRDLCDQLH 631

Query: 595 DLTRKYQLPELMYKAFDVLPEMKVTPHVAWQQELRGQTEEILLNEMVGRVSANMILPYPP 654
              R     + + + + VLPE+ + P  A+ Q +RG+ E + ++ + GR++A M++PYPP
Sbjct: 632 SCYRSNATAKHLKRMYTVLPEIAMKPADAYDQLVRGEVEAVSIDALPGRIAAVMLVPYPP 691

Query: 655 GVPLVLPGEMVTDSSRPVLDFLEMLCEIGAHYPGFETDIHGLYRQKDGS---YTVKVLK 710
           G+PL++PGE  T+S+R ++D+L       + +PGF  D+HGL  + DGS   YTV  +K
Sbjct: 692 GIPLIMPGERFTESTRSIIDYLAFARTFDSSFPGFVADVHGLQHEDDGSGRCYTVDCIK 750