Pairwise Alignments

Query, 711 a.a., lysine decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 783 a.a., amino acid decarboxylase from Magnetospirillum magneticum AMB-1

 Score =  393 bits (1010), Expect = e-113
 Identities = 249/750 (33%), Positives = 381/750 (50%), Gaps = 67/750 (8%)

Query: 19  VRQLHAALEKAGYDVVYPVDDKDLIKMIEMNPRICGVLFDWDK-----YSLELCERISKV 73
           V+Q+   +E+ G++VV     +D    ++ +  I  VL DW+K      + EL   + + 
Sbjct: 26  VQQIITEVERLGFEVVRARRIEDAEIAVQTDAAIGCVLVDWEKGGKGAEATELINLMRRR 85

Query: 74  NEKLPVHAFANEQSTLDISLTDLRLNVHFFEYALGMADDIAIKINQATQEYKDAIMPPFT 133
             ++P+      +   DI +  L     +   A    + IA  +    +++ + +  PF 
Sbjct: 86  GLEMPIVILVRGERFEDIPVDVLDYIDGYVFLAEETPEFIAKNLVSRLKQFAETLKTPFF 145

Query: 134 KALFKYVEEGKYTFCTPGHMGGTAFQKSPVGSIFYDFYGPNTFKADVSISMPELGSLLDH 193
            AL  Y EEG   +  PGH GG  + +SP+G IF +  G   F+ D+  S+ ELG LL H
Sbjct: 146 GALVDYAEEGNQLWTCPGHNGGIFYNRSPIGRIFVEHLGEAVFRDDLDNSVLELGDLLTH 205

Query: 194 SGPHKEAEEYIARTFNADASYIVTNGTSTSNKIVGMFSAPAGSTVLVDRNCHKSLTH-LM 252
            GP  +A++  A+ F A+ +Y V NGTS SNKIV          VL DRN HK+  H  +
Sbjct: 206 EGPALQAQKEAAKIFGAEKTYFVLNGTSASNKIVLSALVAEDDLVLFDRNNHKAAHHGAL 265

Query: 253 MMTDVTPIYFRPTRNAYGILGGIPQNEFSREVIAEKVANTPGASAPS---------YAVI 303
           ++    PI+    RNA G++G I    F  + I  K+ + P    P           AVI
Sbjct: 266 LLGGGIPIFLETDRNAMGMIGPIYAEAFDEQAIRAKIRDNPLVKDPEAWKKPRPFRVAVI 325

Query: 304 TNSTYDGLLYNTQFIKESLD--CKHIHFDSAWVPYTNFNRIYEGKCGMS-----GEAMPG 356
              TYDG +Y+ + I E +   C +I FD AW  +  F+ ++ G  GM       E  PG
Sbjct: 326 EQCTYDGTIYSAEHILERIGHLCDYILFDEAWAGFLKFHPLFRGCYGMGLKDRLDEDSPG 385

Query: 357 KVFYETQSTHKLLAAFSQASMIHV-----KGE---FDRESFNEAFMMHTSTSPQYGIVAS 408
            +   TQSTHK +A FSQAS IHV     KG+    +   FNE F++H STSP Y + AS
Sbjct: 386 II--STQSTHKQMAGFSQASQIHVRDRHIKGQSRRIEHRRFNETFLLHASTSPFYPLFAS 443

Query: 409 TETAAAMMRGNTGRKLMQDSIDRAIRFRKEIKRLKGE--------SEGWFFDVWQPENIE 460
            +  A MMRG +G  L  D+ID  I  RK+++ +K E        +  WFF+ + P+ + 
Sbjct: 444 LDVGAQMMRGRSGEVLWDDTIDLGIELRKKVRAIKREFVEKEKDSARHWFFEPFVPDRVP 503

Query: 461 TTE---------------------CWKLDPNQDWHGFKNLD-DNHMYLDPIKITLLTPGM 498
           + E                      W+  P   WHGFK++    +   DP K+TL+TPG 
Sbjct: 504 SPEGGETMVAWEDLPTETIAADPRYWEFTPGARWHGFKHVSRSGYAMTDPNKLTLITPGF 563

Query: 499 SKD-GELEQSGIPASLVSKYLDEHGIVVEKTGPYNLLFLFSIGIDKSKAMQLLRGLTEFK 557
           ++D G   + GIPA +V++YL E+ +V EK    ++LFL + G++ SKA  LL  L  FK
Sbjct: 564 NRDTGAYAEYGIPAPVVAQYLRENRVVPEKNDLNSMLFLLTPGVESSKAGTLLSSLVAFK 623

Query: 558 RGYDLNLTIRTMLPSLYREDPVFYEGMRIQELAQGIHDLTRKYQLPELMYKAF--DVLPE 615
           R +D N  +   +P   R  P  Y G+RIQ+L   +H   R   +  L    F  +  P 
Sbjct: 624 RRHDDNALLDDAIPEFVRRRPQRYRGLRIQDLCAEMHAFFRDRNVSTLQRAQFSPEHRPH 683

Query: 616 MKVTPHVAWQQELRGQTEEILLNEMVGRVSANMILPYPPGVPLVLPGEMVTDSSRPVLDF 675
           M + P+ A +   R Q + + ++++ GR++  + + YPPG+  ++PGE + + +RP+LD+
Sbjct: 684 MVMRPNDAVRMLTRNQVDYLPIDQIDGRIATTLWVVYPPGIATIIPGERLCERARPMLDY 743

Query: 676 LEMLCEIGAHYPGFETDIHGLYR--QKDGS 703
           L+M       +PGFE +I GLYR  + DGS
Sbjct: 744 LKMFERSANLFPGFEAEIQGLYREIEPDGS 773