Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., Amino acid permease from Rhodanobacter sp. FW510-T8

 Score =  173 bits (438), Expect = 1e-47
 Identities = 122/404 (30%), Positives = 199/404 (49%), Gaps = 13/404 (3%)

Query: 7   KIGLIACTGVVAGNMMGSGIALLPSTLASVGSISIYSWLICIVGALSLAFVFARLATKNP 66
           KIG   CT +V GN++G GI +LP++LA  G  ++  W+I + G L LA VF+ LA   P
Sbjct: 6   KIGFWTCTALVVGNVIGMGIFVLPASLAPFGFNALIGWIIVLAGCLVLARVFSHLARALP 65

Query: 67  QEGGPIAYA----GEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNPIPA 122
              GP  Y     GE+           Y+ + W+ N A+A   V Y++V FP L    PA
Sbjct: 66  DAEGPYGYIRRTLGELPAYLALWA---YWVSLWLTNAALATGVVGYMTVVFPPLGAIQPA 122

Query: 123 GLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFG-WTHFDS-ALYSQNWN 180
            L  +  +W    +NL G      +  +  VL L+P++  AL G W   DS A Y  +  
Sbjct: 123 -LFALCLLWSVVAINLFGVRTGGGVQIVTTVLKLLPMLAIALLGGWVLLDSPASYVAHPP 181

Query: 181 VSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGLIYVLST 240
            +  + G  V+ A  I L++ +G+ESA+V +  V++P RT+P +TM GT L  +IY++ +
Sbjct: 182 ATPVTLG-GVMAASTIALFAMLGIESASVPAARVDDPARTIPRSTMTGTVLTAIIYIIVS 240

Query: 241 QMISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGKR 300
            +   +    E+A + APFAL       + +  +++ F  ++   +L  W +L GE  + 
Sbjct: 241 TVPLLLIRQQELAEANAPFALLMDRFAAAGSGRWLALFVVISGLGALNGWTLLAGELTRT 300

Query: 301 AANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHASDLFNQLTTDAV 360
            A++G  P V    +R+G P   LL+  ++ +   ++ M +S     A     ++ T A 
Sbjct: 301 MAHNGVLPAVLARNNRHGAPAVALLVIGALAS--AMIGMSYSKSLVSAFTFLTRVVTAAN 358

Query: 361 LLTMLPYFYSSINLIRFEGMTTRNTFVMLFSGIASLFCMVALAG 404
           L   L    + + L R    T  +  V+L +    LF + A  G
Sbjct: 359 LPLYLCCALALVVLWRRRTATCTSVRVLLVAVTCVLFVVFAFVG 402