Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., amino acid permease from Rhodanobacter sp000427505 FW510-R12

 Score =  167 bits (422), Expect = 8e-46
 Identities = 120/407 (29%), Positives = 196/407 (48%), Gaps = 13/407 (3%)

Query: 4   NAKKIGLIACTGVVAGNMMGSGIALLPSTLASVGSISIYSWLICIVGALSLAFVFARLAT 63
           N   IG   CT +V GN++G GI +LP++LA  G  ++  W+I + G L LA VF+ LA 
Sbjct: 3   NGNTIGFWTCTALVVGNVIGMGIFVLPASLAPFGFNALIGWIIVLAGCLVLARVFSHLAR 62

Query: 64  KNPQEGGPIAYA----GEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNP 119
             P   GP  Y     GE+           Y+ + W+ N A+A   V Y++V FP L   
Sbjct: 63  AMPDAEGPYGYIRRTLGELPAYLALWA---YWVSLWLTNAALATGVVGYMAVVFPPLGAL 119

Query: 120 IPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFG-WTHFDS-ALYSQ 177
            PA L  +  +W    +NL G      +  +   L L+P++  AL G W    S A Y+ 
Sbjct: 120 QPA-LFALGLLWAVVAINLFGVRTGGGVQIVTTALKLLPMLAIALLGGWLLLTSPASYTA 178

Query: 178 NWNVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGLIYV 237
           +   +  + G  V  A  I L++ +G+ESA+V +  V++P RT+P +TM GT LA +IY+
Sbjct: 179 HLPTTPITLG-GVTAAATIALFAMLGIESASVPAARVDDPARTIPRSTMTGTVLAAVIYI 237

Query: 238 LSTQMISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVGEA 297
           + + +   +   +E+A + APFAL       + +  +++ F  ++   +L  W +L GE 
Sbjct: 238 IVSTVPLLLIHQTELAEASAPFALLMDRFAAAGSGRWLALFVVISGLGALNGWTLLGGEL 297

Query: 298 GKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHASDLFNQLTT 357
               A++G  P +    +R+G P   LL+  ++ +  +++ M +S     A     ++ T
Sbjct: 298 TCTMAHNGVLPAMLARNNRHGAPAVALLLTGALAS--VMIAMSYSKSLVAAFTFLTRVVT 355

Query: 358 DAVLLTMLPYFYSSINLIRFEGMTTRNTFVMLFSGIASLFCMVALAG 404
            A L   L    + I L R    T      +L      LF + A  G
Sbjct: 356 AANLPLYLCCALALIVLWRRRSATCATWRALLAGVTCVLFVVFAFIG 402