Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., amino acid APC transporter from Pseudomonas simiae WCS417

 Score =  135 bits (340), Expect = 3e-36
 Identities = 125/461 (27%), Positives = 212/461 (45%), Gaps = 31/461 (6%)

Query: 1   MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLAS---VGSISIYSWLICIVGALSLAFV 57
           MS +  K+ L A   +V G+M+G GI  LP  +A+   VG++ I  W+I  VG L+LAFV
Sbjct: 1   MSESPGKLRLGALVALVVGSMIGGGIFSLPQNMAASADVGAVLI-GWVITAVGMLTLAFV 59

Query: 58  FARLATKNPQ-EGGPIAYA-GEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPV 115
           F  LA + P  +GG  AYA        GF +   Y+ + W+GN+   +   S L  FFP+
Sbjct: 60  FQTLANRKPDLDGGVYAYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPI 119

Query: 116 LN--NPIPAGLATIASVWLFTLVNLLG---GSWVSRLCTIGLVLILIPVVGTALFGWTH- 169
               N   A +     +W    + L G    ++++ + T+  V+ L+  V  ALF +   
Sbjct: 120 FGEGNTPAAVIGASVLLWAVHFLVLRGIKEAAFINLVTTVAKVVPLVLFVLIALFAFKLD 179

Query: 170 -FDSALYSQNWNVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLG 228
            F + ++    N   GS  + V   +L+ +W F+G+E A++ S   E  +  V  AT++G
Sbjct: 180 IFTADIWGLK-NPDLGSVMNQVRNMMLVTVWVFIGIEGASIFSARAEK-RSDVGKATVIG 237

Query: 229 TGLAGLIYVLSTQMISGMFPASEVAASGAP-FALATTALFGSWTAPFVSAFTALACFTSL 287
                L  +L   +  G+    E+A    P  A     + G W A  +S    ++   +L
Sbjct: 238 FITVLLFLMLVNVLSLGIMTQPELAKLQNPSMAAVLEHVVGHWGAVLISVGLVISLLGAL 297

Query: 288 GSWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAH 347
            SW++L  E    AA D   P+   + + N VP   L + ++M+ + +++ +F +S    
Sbjct: 298 LSWVLLCAEIMFAAAKDHTMPEFLRKENANHVPANALWLTNAMVQIFLVITLFSAS---- 353

Query: 348 ASDLFNQLTTDAVLLTMLPYFYSSIN--LIRFEGMTTRNTFVM----LFSGIASLFCMVA 401
               +  L   A  + ++PY +S+    L+   G T  N        LF G  +L   V 
Sbjct: 354 ---TYLSLIYLATSMILVPYLWSAAYALLLAVRGETYENALKERQKDLFIGAIALIYAVW 410

Query: 402 L--AGAEGSTLTATFIMSLIILMFYSKKAGLDKYLETHPQQ 440
           L  AG     L +  + +   ++F   K  L K + T+ ++
Sbjct: 411 LLYAGGTKYLLLSALLYAPGAILFAKAKRELGKPIFTNVEK 451