Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 108/442 (24%), Positives = 193/442 (43%), Gaps = 41/442 (9%)

Query: 8   IGLIACTGVVAGNMMGSGIALLPSTLASVGSISIYSWLICIVGALSLAFVFARLATKNPQ 67
           + L AC GV  G  +GS  A+        G   + S++I  +  L +      +A  NP 
Sbjct: 30  MALGACIGV--GLFLGSAKAI-----EMAGPAIMLSYIIGGLAILVIMRALGEMAVHNPV 82

Query: 68  EGGPIAYAGE-VSPVFGFQTGVLYYHANWIGNLAIAITGVS-YLSVFFPVLNNPIPAGLA 125
            G    YA + + P+ GF TG  Y+   W+      IT V+ Y+ V+FP      P  + 
Sbjct: 83  AGSFSRYAQDYLGPLAGFLTGWNYWFL-WLVTCVAEITAVAVYMGVWFP----DTPRWIW 137

Query: 126 TIASVWLFTLVNLLGGS-------WVSRLCTIGLVLILIPVVGTALFGWTHFDSALYSQN 178
            +A++     +NL+          W + +  + ++ ++I  VG   FG+ +   AL   N
Sbjct: 138 ALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGNDGVALGISN 197

Query: 179 WNVSAG---SDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGLI 235
                G   +    V+ ++ + +++++GVE   +++G  +NP++T+P A         L 
Sbjct: 198 LWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPSAIGSVFWRILLF 257

Query: 236 YVLSTQMISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVG 295
           YV +  +I  ++P +E+   G+PF +    L     A  ++     A  +S    +   G
Sbjct: 258 YVGALFVILSIYPWNEIGTQGSPFVMTFERLGIKTAAGIINFVVITAALSSCNGGIFSTG 317

Query: 296 EAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLM-------FFSSETAHA 348
                 A +G  P  F +T  NGVP+K LL+  S+  LL+ VL+        F   T+ A
Sbjct: 318 RMLYSLAQNGQAPATFAKTSSNGVPRKALLL--SIFALLLGVLLNYLVPEKVFVWVTSIA 375

Query: 349 SDLFNQLTTDAVLLTMLPYFYSSINLIRFEGMTTRNTF--VMLFSGIASLFCMVALAGAE 406
           +  F  + T  ++L     F  S++     G+  R     V  +  +A L  +V L    
Sbjct: 376 T--FGAIWTWLMILLAQLKFRKSLSPAEQAGLKYRMWLYPVSSYLALAFLLLVVGLMAYF 433

Query: 407 GSTLTATFI----MSLIILMFY 424
             T  A ++    + L+ ++FY
Sbjct: 434 PDTRIALYVGPVFLVLLTVLFY 455