Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., arginine/ornithine antiporter from Pseudomonas putida KT2440

 Score =  130 bits (327), Expect = 9e-35
 Identities = 122/461 (26%), Positives = 209/461 (45%), Gaps = 31/461 (6%)

Query: 1   MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLAS---VGSISIYSWLICIVGALSLAFV 57
           MS ++ K+ L A   +V G+M+G GI  LP  +A+   VG++ I  W I  VG L+LAFV
Sbjct: 1   MSDSSGKLKLGALVALVVGSMIGGGIFSLPQNMAASAGVGAVLI-GWAITAVGMLTLAFV 59

Query: 58  FARLATKNPQ-EGGPIAYA-GEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPV 115
           F  LA + P  +GG  AYA        GF +   Y+ + W+GN+   +   S L  FFP+
Sbjct: 60  FQTLANRKPDLDGGVYAYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPI 119

Query: 116 LN--NPIPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWTHFDSA 173
               N   A +     +W    + L G    + +  +  V  ++P+V  AL     F   
Sbjct: 120 FGEGNTPAAIIGASILLWAVHFLVLRGIKEAAFINLVTTVAKVVPLVLFALICLFAFRLD 179

Query: 174 LYSQN-WNVSA---GSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRT-VPLATMLG 228
           +++ + W +     GS  + V   +L+ +W F+G+E A++ S   E  KRT V  AT++G
Sbjct: 180 IFTADIWAMGTPELGSVMNQVRNMMLVTVWVFIGIEGASIFSARAE--KRTDVGKATVIG 237

Query: 229 TGLAGLIYVLSTQMISGMFPASEVAASGAP-FALATTALFGSWTAPFVSAFTALACFTSL 287
                L  VL   +  G+    E+A    P  A     + G W A  +S    ++   +L
Sbjct: 238 FVTVLLFLVLVNVLSLGIMTQPELAKLQNPSMAAVLEHVVGHWGAVLISVGLVISLLGAL 297

Query: 288 GSWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAH 347
            SW++L  E    AA D   P+     +   VP   L + ++M+ + +++ +F SS    
Sbjct: 298 LSWVLLCAEIMFAAAKDHTMPEFLRRENAKQVPANALWLTNAMVQIFLVITLFSSS---- 353

Query: 348 ASDLFNQLTTDAVLLTMLPYFYS-------SINLIRFEGMTTRNTFVMLFSGIASLFCMV 400
               +  L   A  + ++PY +S       ++    +E         ++  GIA L+ + 
Sbjct: 354 ---TYLSLIYLATSMILVPYLWSAAYAFLLALRSETYEQALAERKKDLIIGGIALLYAIW 410

Query: 401 AL-AGAEGSTLTATFIMSLIILMFYSKKAGLDKYLETHPQQ 440
            L AG     L +  + +   ++F   K  + K + T+ ++
Sbjct: 411 LLYAGGVKYLLLSALLYAPGAILFAKAKREVGKPVFTNVEK 451