Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Arginine/ornithine antiporter from Pseudomonas sp. DMC3

 Score =  129 bits (323), Expect = 3e-34
 Identities = 120/449 (26%), Positives = 207/449 (46%), Gaps = 33/449 (7%)

Query: 1   MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLAS---VGSISIYSWLICIVGALSLAFV 57
           MS   +K+ L A   +V G+M+G GI  LP  +A+    G+I I  W I  +G L+LAFV
Sbjct: 1   MSQPTQKLRLGALIALVVGSMIGGGIFSLPQNMAARADAGAILI-GWGITAIGMLTLAFV 59

Query: 58  FARLATKNPQ-EGGPIAYA-GEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPV 115
           F  LA + P+ + G  AYA        GF +   Y+ + W+GN+   +   S L  FFPV
Sbjct: 60  FQTLANRKPELDSGVYAYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPV 119

Query: 116 L---NNPIPAGLATIA--SVWLFTLVNLLGGSWVSRLCTIGLV--LILIPVVGTALFGWT 168
               N PI  G A++   +V    +  +   + +++L T+  V  LI+  V+    F   
Sbjct: 120 FGQGNTPIAIGCASVLLWAVHFLVMRGIKEAALINQLTTVAKVVPLIMFIVIAAVAFKAE 179

Query: 169 HFDSALYSQNWNVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLG 228
            F   ++ ++ N + G     V   +L+ ++ F+G+E A+V S   E  +  V  AT++G
Sbjct: 180 IFTRDIWGRS-NPNFGGVMDQVRNMMLVTVFVFIGIEGASVYSARAEK-RSDVGRATVIG 237

Query: 229 -TGLAGLIYVLSTQMISGMFPASEVAASGAP-FALATTALFGSWTAPFVSAFTALACFTS 286
             G+  L+ VL   +  G+    E+A    P  A     + G W A  +S   A++   +
Sbjct: 238 FLGVLALL-VLVNVLSLGIMSQPELANLQNPSLAAVLEHIVGPWGALLISIGLAISLLGA 296

Query: 287 LGSWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETA 346
           L SW +L  E     A D   P    + + N VP   L + + M+ + +L+ +F      
Sbjct: 297 LLSWALLCAEILFATAKDKTMPAFLKKENNNHVPVNALWLTNVMIQIFLLITLF------ 350

Query: 347 HASDLFNQLTTDAVLLTMLPYFYSSINLI-------RFEGMTTRNTFVMLFSGIASLFCM 399
            ++  +  L   A  + ++PY +S+   +        +E  +   T  +L  GIA ++ +
Sbjct: 351 -SAGTYTSLIYLASSMILVPYLWSAAYAVLLSGRGETYEHASAERTKDLLIGGIALVYAV 409

Query: 400 VAL-AGAEGSTLTATFIMSLIILMFYSKK 427
             L AG     L +  + +  +++F   K
Sbjct: 410 WLLYAGGVKYLLLSALLYAPGVILFAKAK 438