Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., predicted lysine/cadaverine transporter (NCBI) from Escherichia coli BW25113

 Score =  616 bits (1589), Expect = 0.0
 Identities = 293/425 (68%), Positives = 359/425 (84%)

Query: 3   SNAKKIGLIACTGVVAGNMMGSGIALLPSTLASVGSISIYSWLICIVGALSLAFVFARLA 62
           S+AKKIGL ACTGVVAGNMMGSGIALLP+ LAS+G I+I+ W+I I+GA+SLA+V+ARLA
Sbjct: 2   SSAKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWIISIIGAMSLAYVYARLA 61

Query: 63  TKNPQEGGPIAYAGEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNPIPA 122
           TKNPQ+GGPIAYAGE+SP FGFQTGVLYYHANWIGNLAI IT VSYLS FFPVLN+P+PA
Sbjct: 62  TKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNDPVPA 121

Query: 123 GLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWTHFDSALYSQNWNVS 182
           G+A IA VW+FT VN+LGG+WVSRL TIGLVL+LIPVV TA+ GW  FD+A Y+ NWN +
Sbjct: 122 GIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVMTAIVGWHWFDAATYAANWNTA 181

Query: 183 AGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGLIYVLSTQM 242
             +DGHA+I ++L+CLW+FVGVESAAVS+GMV+NPKRTVPLATMLGTGLAG++Y+ +TQ+
Sbjct: 182 DTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVYIAATQV 241

Query: 243 ISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGKRAA 302
           +SGM+P+S +AASGAPFA++ + + G+W AP VSAFTA AC TSLGSWMMLVG+AG RAA
Sbjct: 242 LSGMYPSSVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAA 301

Query: 303 NDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHASDLFNQLTTDAVLL 362
           NDGNFPKV+GE D NG+PKKGLL+A+  MT LM+++   +S    ASDLF +LT  AVLL
Sbjct: 302 NDGNFPKVYGEVDSNGIPKKGLLLAAVKMTALMILITLMNSAGGKASDLFGELTGIAVLL 361

Query: 363 TMLPYFYSSINLIRFEGMTTRNTFVMLFSGIASLFCMVALAGAEGSTLTATFIMSLIILM 422
           TMLPYFYS ++LIRFEG+  RN   ++ S +  +FC +AL GA    L  TFI+SLIILM
Sbjct: 362 TMLPYFYSCVDLIRFEGVNIRNFVSLICSVLGCVFCFIALMGASSFELAGTFIVSLIILM 421

Query: 423 FYSKK 427
           FY++K
Sbjct: 422 FYARK 426