Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., Gamma-aminobutyrate permease and related permeases from Enterobacter asburiae PDN3

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 101/447 (22%), Positives = 191/447 (42%), Gaps = 44/447 (9%)

Query: 5   AKKIGLIACTGVVA-GNMMGSGIALLPSTLASVGSISIYSWLICIVGALSLAFVFARLAT 63
           A+ I LIA  G +  G  MGS      STL   G   + +++I  +    +      +  
Sbjct: 14  ARHIELIALGGTIGVGLFMGSA-----STLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLF 68

Query: 64  KNPQEGGPIAYAGE-VSPVFGFQTGVLYYHANWIGNLAIAITGVS----YLSVFFPVLNN 118
             P  G    YA   +SP FG+ T   Y    W   +A+ I+ ++    Y+  +FP +  
Sbjct: 69  LEPVTGSFAVYAHRYMSPFFGYLTAWSY----WFMWMAVGISEITAIGVYVQFWFPDMVQ 124

Query: 119 PIPA-------GLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWTHFD 171
            IPA        LA +A+V L+  +      W + +    ++++++  +G   FG+ +  
Sbjct: 125 WIPALIAVGLVALANLAAVRLYGEIEF----WFAMIKVTTIIVMIVVGLGVIFFGFGNGG 180

Query: 172 SALYSQNWNVSAG---SDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLG 228
            A+   N   + G         +TA+ I + S+ GVE   +++G  +NP+ T+  A    
Sbjct: 181 HAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240

Query: 229 TGLAGLIYVLSTQMISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTAL-ACFTSL 287
                + YV +  +I  +FP +E+  +G+PF L T A  G   A  +  F  L A  +  
Sbjct: 241 LWRILIFYVGAIFVIVTIFPWNEIGTTGSPFVL-TFAKIGITAAAGIINFVVLTAALSGC 299

Query: 288 GSWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAH 347
            S M   G      + +   P    +  R GVP  G+ ++ +    ++L+    +    +
Sbjct: 300 NSGMYSCGRMLYALSKNNQLPAAMSKVSRAGVPVAGVAVSIA----ILLIGSCLNYIIPN 355

Query: 348 ASDLFNQLTTDAVLLTMLPYFYSSINLIRFEGMTTRNTFVMLFSGIASLFCMVALAGAEG 407
              +F  + + +VL  M+P+F   I+ +RF     +      F  I   +          
Sbjct: 356 PQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKAIESHPFRSILFPY---------A 406

Query: 408 STLTATFIMSLIILMFYSKKAGLDKYL 434
           + LT  F++ ++I M++++   +  ++
Sbjct: 407 NYLTMAFLICVLIGMYFNEDTRMSLFV 433