Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., transporter, basic amino acid/polyamine antiporter (APA) family from Enterobacter asburiae PDN3

 Score =  108 bits (269), Expect = 5e-28
 Identities = 110/394 (27%), Positives = 169/394 (42%), Gaps = 40/394 (10%)

Query: 6   KKIGLIACTGVVAGNMMGSGIALLPSTLASVGSIS--IYSWLICIVGALSLAFVFARLAT 63
           KK+GL A T +V  +M+G+G+  LP  +A+V S S  I  W I  VG L LAF    L  
Sbjct: 3   KKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPSALIIGWGITGVGILLLAFAMLLLTR 62

Query: 64  KNPQ-EGGPIAYAGEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLN----- 117
             P  +GG   YA E    FG   G       W   L   I  VSYL + F  L+     
Sbjct: 63  IRPDLDGGIFTYARE---GFGELIGFCSAWGYW---LCAVIANVSYLVIVFSALSFFTDT 116

Query: 118 ---------NPIPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALF--- 165
                    N   + +     +W    + L G   V    +I LV  L  +V   LF   
Sbjct: 117 PELRLFGDGNTWQSIVGASVLLWFVHWLVLRG---VQTAASINLVATLAKLVPLGLFIVL 173

Query: 166 GWTHFDSALYSQNWN-VSAGSD-GHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPL 223
            +  F   ++  +++ V+ G      V   +LI LW F+GVE A V S    N KR V  
Sbjct: 174 AFIAFRMDVFKLDFSGVALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN-KRDVGR 232

Query: 224 ATMLGTGLAGLIYVLSTQMISGMFPASEVAASGAP-FALATTALFGSWTAPFVSAFTALA 282
           AT+L    A  +Y+L T +  G+    E+A    P  A     + G W    ++A   ++
Sbjct: 233 ATLLAVLAALGVYLLVTLLSLGVVARPELAEMRNPSMAGLMVKMLGPWGDVVIAAGLIVS 292

Query: 283 CFTSLGSWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFS 342
              +  SW ++  E    AA    FP++F   ++N  P   L + +  + + ++++    
Sbjct: 293 VCGAYLSWTIMAAEVPFLAATHKAFPRLFARQNQNSAPSASLWLTNISVQVCLVLIWLTG 352

Query: 343 SETAHASDLFNQLTTDAVLLTMLPYFYSSINLIR 376
           S+       +N L T A  + ++PYF     L++
Sbjct: 353 SD-------YNTLLTIASEMILVPYFLVGAYLLK 379