Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Putative arginine/ornithine antiporter from Escherichia coli ECRC62

 Score =  102 bits (253), Expect = 3e-26
 Identities = 100/391 (25%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 6   KKIGLIACTGVVAGNMMGSGIALLPSTLASVGSIS--IYSWLICIVGALSLAFVFARLAT 63
           KK+GL A T +V  +M+G+G+  LP  +A+V S +  +  W I   G L LAF    L  
Sbjct: 3   KKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTR 62

Query: 64  KNPQ-EGGPIAYAGEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLN----- 117
             P+ +GG   YA E    FG   G       W   L   I  VSYL + F  L+     
Sbjct: 63  IRPELDGGIFTYARE---GFGELIGFCSAWGYW---LCAVIANVSYLVIVFSALSFFTDT 116

Query: 118 ---------NPIPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWT 168
                    N   + +   A +W+   + L G    + +  +  +  L+P+    +    
Sbjct: 117 PELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVATLAKLLPLGLFVVLAMM 176

Query: 169 HFDSALYSQNW-NVSAGSD-GHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATM 226
            F    +  ++  ++ G      V   +LI LW F+GVE A V S    N KR V  AT+
Sbjct: 177 MFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN-KRDVGKATL 235

Query: 227 LGTGLAGLIYVLSTQMISGMFPASEVAASGAP-FALATTALFGSWTAPFVSAFTALACFT 285
           L    A  +Y+L T +  G+    E+A    P  A     + G W    ++A   ++   
Sbjct: 236 LAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCG 295

Query: 286 SLGSWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSET 345
           +  SW ++  E    AA    FP++F   +    P   L + +  + + ++++    S+ 
Sbjct: 296 AYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSD- 354

Query: 346 AHASDLFNQLTTDAVLLTMLPYFYSSINLIR 376
                 +N L T A  + ++PYF     L++
Sbjct: 355 ------YNTLLTIASEMILVPYFLVGAFLLK 379